Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00634 ATGAGCATTAGAGAGTGGGCTTCCCAACCTTATAACTATGTTTCCAATTGCTTGCGTGAGTTCCTTGATATAGTTCCCAGTGTTGATACTGTTTTTACTTTTTACCTTTGCAGGAGGTCATTGTGCAGGAAGCTTGAGGATGGTGACATTGTAAATGTTGATGTCTCTGTGTACTATAAAGGTGTTCATGCTGATCTCAATGAAACATACTTTGTGGGAAACGTTGATGAAGAGTCTTGCCAACTAGTAAAATGCACATATGAGTGCCTGGAGAAGGCAATATCCATTGTTAAACCAGGAGTACGGTTCCGGGAAATTGGTGAAGTTATTAGCCGTCATGCTTCAATGTCTGGCTTCTCAGTGGCAAGATCATATTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCACCAAGCATTCCTCATTATGCAAGAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAGACCTTTACAATTGAACCAATGATCAATGCTGGTGTCTGGCGTGATCGAATGTGGCCTGATGGATGGACTGATGTTACAACCGATGGTAAACGAAGTGCTCAATTTGAGCATACTCTTCTGGAGTTGGCAAGTTTTCTGTTTAGGAGTAATGATTTTCAGGAAAATGAGTGCTCTACCCTTTTCATGGAGGTTGCTTCTGAAAGTGAGAAAAAAGATGTAGAAAATGAGTGCTCGGTTCTGATGGACACCCACTGTGATGTTCGTGAAGATGGGATGAAAACAGAGGTGCCCGCGGAGAGCTTTGTTTTAAAAGAAATTGAATTTGACGTTGGTGAAGTTGCAGAAAGAGAAACAGAGGAGTTTGTTTCCATGGAAACTAACTCAGATGTTCAAAAGAGAGAGTATAACTCTGATTTCGATCAAGGAAGTGTGGAGAGAGAAGAGGAAATAGAAGAACCTGCGTCTGGGGAGATTGACCCTGTTGTTCACGAAGAAGTGATGAAAATCGATGGAAATGAAACAAGCAGCGATGTTTTAATGGAGAATATCTCCGAAGAAACTGTAAATGGCGATGGGGAGAAAATAGAAGAAAATGAGGTCTCTGTTTTCAATACTTCGTCAAGCTTCAAGCACGCAAAGGAGTTTGATTTGGGTTTGGGATTTTCGCTCTCGCAATTTCAGGTGGTTCTGTTTCGTTCTTACATTTTGGGGCCGATGAGGAAACGTCCGAACAACGTCTTGGTGGTTGGTGAAGGCAACAGTGATATCGTTTGCAGGAAGGCGAGGAAGGGGACGATTAGATCGAAGAGGACGACGGGCTTAAGAAACTGCGCCGGAGTTCAACAACGGAAGAGTGTAAGTGGCGATGGAGATGAGACATTCCGTCGGCGGAGGAGAAGAGGAGCGGAAGAGGTGAAAGGAAGAAACAGTGGAAGGTCCAATACGAATAGTAGCAAAACAGAACCGGTCAGGCCCAAACTGGAAGACAGACTTTTGCTTGACCAACACGAAATTGTTCCATTTTCTGTTCCTTCCTCAGTAACCCTAACTTTCAGCTCTTGGCAATCGATGGCTGGTGAATCTGATGTGCCGGAAAACACCCTCTCTTGCGCTAACTGTGGAAAACCCGCCAATCTTCAGTGCCCAAAATGCATGGAATTGAAGCTTCCTCGTGAAGGTTCTGCCTTCTGGTTTGTGACTCTCCCTACTTTGCCTAAGATTGATTTAGTTATTAGGCATTGGAGATTTAGTGAATGCCATTGTTGCTCCAAATGGAACCATGTAGAAATTGGGGTTGAGCATGCTCTCAGGAATGTTTCAAGTCTTCATGGAGCTCGCACAAATCAGTGCATCTTAAGGCAAAACTATCCTCACCTGACACACAAAATTCAGGCTCAGTTGGTGAAGAGAGGGCAGGCTCGAACTCCAAAGCTTCCTTACTTTGATTGGACTGGATCACTGCGGCCATATCCCATTTCTAGTAAACGGATTGTCCCAGGTCAAATTGATAAACCTGATTGGGCTGATGATGGAATCCCAAAAATCGAGCCCAATAGTGGTCTGCAGCATACTGTTGAGGTTAAAACTCCAGATCAAATTGAGAGAATGAGGGAAACTTGTCGGCTATATATCACAGGTAGTGGTGCAGAACAGCAGGATGACTCTGTTTCCGATTTTTTTATATTCATTGCGAGGGAGGTGTTGGATGCAGCTGCACGTATTATTCAGCCTGGTGTGACAACTGATGAGATTGATAGAGTTGTTCATGAAGCAACTATTGCTGCAGGTGATCTCAATGAAACATACTTTGTAGGAAATGTTGATGAAGAGTCTCGCCAACTAGTAAAATGCACTTATGAGTGCTTGGAGAAGGCAATATCCATTGGAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAAACCTTTACAATTGAACCAATGATCAATGCTGGTGTCTGGCGTGATCGTATGTGGCCTGATGGATGGACTGCTGTTACAGCTGATGGTAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACAGATACTGGTGTTGAAGTTTTAACAGGGAGGTTGCAGACTTCACCCGATGTTTTTCCTTGGCTAAATTCGTAA 2586 0.437 MSIREWASQPYNYVSNCLREFLDIVPSVDTVFTFYLCRRSLCRKLEDGDIVNVDVSVYYKGVHADLNETYFVGNVDEESCQLVKCTYECLEKAISIVKPGVRFREIGEVISRHASMSGFSVARSYCGHGIGELFHCAPSIPHYARNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTDVTTDGKRSAQFEHTLLELASFLFRSNDFQENECSTLFMEVASESEKKDVENECSVLMDTHCDVREDGMKTEVPAESFVLKEIEFDVGEVAERETEEFVSMETNSDVQKREYNSDFDQGSVEREEEIEEPASGEIDPVVHEEVMKIDGNETSSDVLMENISEETVNGDGEKIEENEVSVFNTSSSFKHAKEFDLGLGFSLSQFQVVLFRSYILGPMRKRPNNVLVVGEGNSDIVCRKARKGTIRSKRTTGLRNCAGVQQRKSVSGDGDETFRRRRRRGAEEVKGRNSGRSNTNSSKTEPVRPKLEDRLLLDQHEIVPFSVPSSVTLTFSSWQSMAGESDVPENTLSCANCGKPANLQCPKCMELKLPREGSAFWFVTLPTLPKIDLVIRHWRFSECHCCSKWNHVEIGVEHALRNVSSLHGARTNQCILRQNYPHLTHKIQAQLVKRGQARTPKLPYFDWTGSLRPYPISSKRIVPGQIDKPDWADDGIPKIEPNSGLQHTVEVKTPDQIERMRETCRLYITGSGAEQQDDSVSDFFIFIAREVLDAAARIIQPGVTTDEIDRVVHEATIAAGDLNETYFVGNVDEESRQLVKCTYECLEKAISIGNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTDTGVEVLTGRLQTSPDVFPWLNS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00634 861 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 125 143 IPR002467 GO:0006508|GO:0070006
Vimu9g00634 861 NCBIfam methionine aminopeptidase, type I 44 195 IPR002467 GO:0006508|GO:0070006
Vimu9g00634 861 Gene3D Creatinase/methionine aminopeptidase superfamily 783 857 IPR036005 -
Vimu9g00634 861 Gene3D Creatinase/methionine aminopeptidase superfamily 637 752 IPR036005 -
Vimu9g00634 861 Gene3D Creatinase/methionine aminopeptidase superfamily 27 199 IPR036005 -
Vimu9g00634 861 Pfam Metallopeptidase family M24 43 196 IPR000994 -
Vimu9g00634 861 Pfam Metallopeptidase family M24 720 839 IPR000994 -
Vimu9g00634 861 SUPERFAMILY Creatinase/aminopeptidase 719 847 IPR036005 -
Vimu9g00634 861 PANTHER METHIONINE AMINOPEPTIDASE 786 848 - -
Vimu9g00634 861 PRINTS Methionine aminopeptidase-1 signature 49 65 IPR001714 -
Vimu9g00634 861 PRINTS Methionine aminopeptidase-1 signature 150 162 IPR001714 -
Vimu9g00634 861 PRINTS Methionine aminopeptidase-1 signature 119 131 IPR001714 -
Vimu9g00634 861 MobiDBLite consensus disorder prediction 444 463 - -
Vimu9g00634 861 SUPERFAMILY Creatinase/aminopeptidase 43 196 IPR036005 -
Vimu9g00634 861 MobiDBLite consensus disorder prediction 433 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00634 Vimu-Chr9 7839596 7853558 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00634 K01265 - gmx:100785022 306.219