Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00630 ATGACTGTAGCTTCTGAAAAACAAGAACGTACTCTGATAAAAGGATGTAGACCAGAAGTAGATCTTTGGTCATGTCTTCCAAGATTTCTGGCTACATGGTTAGTCGCAAAAGTTTGTTCAACCATCTCTTTCTTGGCGTTAGCTATGCTACCCACTGGAGCAAAAGAGACCCAATTACGTGAGAGCAACAGCCAAAAGGTCCATCCTCAACCAATGGAAGAGGCCATGAATCAGAATCCAGAAGCAATGGAGACTCTAATATCTAAAATTTTTACAAACATCTCTTCCTTGAAGTCAGCTTATATCCAGCTACAAGCTGCTCATACTCCTTATGACCCTGATAAAATCCACACTGCAGATAAACTTGTTATTAGTGAGCTGAAAAATCTGTCTGAACTCAAGCATTTCTACAGGGAGAACAATCCAAAACCCGTGTGTGTTTCTCCCCAAGACTCACGATTAGCTGCAGAAATTCAAGAACAACAGAGTCTTCTGAAAACTTATGAGGTTATGGTGAAGAAATTCCAATCTGAAATCCAGAACAAAGACTCTGAGATCCACCAATTGCAGCAGCAGATTGAGGAAGCTAGCCAGAAGCGAGCAAAACTAGAGAAAAATCTGAAGCTTAGAGGTTTGTCTACCAAAGAATCTGAAGAAGAAAATGGCTTTTTCCCTGTTGATCTAACTCCAGATCTGTTTACCTCTGCTGTGGAAGCAGCTGCAAAAGCCATTCATGATTTTTCTAAACCTTTGATCAACATGATGAAAGCAGCTGGGTGGGACCTTGATGCTGCTGCAAACTCAATCGAACCTGATGTTGTTTATGCAAAGAGAGCTCATAAGAAATATGCATTTGAGTCTTACATATGCCAAAGAATGTTTAGTGGCTTTGAGCTAGAAAGCTTCTCTGTTAAATCAGACAATATTACTGTAACTAAAGAGAGCTTCTTCCACCAATTTCTTGCTTTAAGAGAGATGGATCCCTTGGACATGCTAGGGCAAAATCCAGATTCCATATTTGGGAAATTTTGCAGGAGCAAATACTTAGTGGTAGTTCATCCAAAGATGGAGGCATCATTCTTCGGAAATTTAGATCAGCGAAATTATGTGATGGGTGGAGGGCATCCAAGGACTCCCTTTTACCAGGCTTTTCTTAAACTGACCAAGGCAATCTGGCTTTTACACAGGTTGGCTTATTCTTTTGAGCCCAACGTTAAGGTATTCCAGGTTAAAGGAGGGAGTGAGTTCTCAGATGTTTATATGGAAAGTGTGGTCAAGAATCTGATTTTGGATGACAATGATGAAAAACCCAAAGTTGGTTTGATGGTTATGCCTGGATTTTGGATTGGGGGAAGTGTGATTCAGAGTAAAGTCTATCTGTCTGGTATGAAGGTTGCTGAATGA 1404 0.4053 MTVASEKQERTLIKGCRPEVDLWSCLPRFLATWLVAKVCSTISFLALAMLPTGAKETQLRESNSQKVHPQPMEEAMNQNPEAMETLISKIFTNISSLKSAYIQLQAAHTPYDPDKIHTADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQQIEEASQKRAKLEKNLKLRGLSTKESEEENGFFPVDLTPDLFTSAVEAAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESYICQRMFSGFELESFSVKSDNITVTKESFFHQFLALREMDPLDMLGQNPDSIFGKFCRSKYLVVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLTKAIWLLHRLAYSFEPNVKVFQVKGGSEFSDVYMESVVKNLILDDNDEKPKVGLMVMPGFWIGGSVIQSKVYLSGMKVAE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00630 467 Coils Coil 158 206 - -
Vimu9g00630 467 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 44 461 IPR040225 GO:0009639|GO:0009959
Vimu9g00630 467 Pfam Plant protein of unknown function (DUF641) 79 205 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00630 Vimu-Chr9 7801103 7803246 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00630 - - gmx:100499972 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00630 9 7801103 7803246 Vimu9g00630 9 7801103 7803246 ECH