Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00624 ATGCCATCACCTTACCCTCTCAGAAACCTCACCACCCCATCACCACCACTTCTCCATTTTCTTCCTTCAACCCATTTCACTCTCTCATTCTTCCACCCTCCATTATTCCATTCCCATGCCATGATGCTTTCATTTTCTTCTTCTGCATCTTCATCTTCTTCTGTATCTTCATCTTCTCCTTCAACATCATCCACTCCCCAACAACACCACGAACAACATTCTCAAAACAACCTTAATCAACACAAACTCTCCCACGTTCTCAAATACCACAACCAAACCAAGCACAACTTCAACCATTACGCCCGGGGGCCTCACGGCCTCGACTGGGCCAACCAGCCCAACCCGTTTCGTAGATACCTCTCCGCCCCTCTCATCTCTCTTCTCCACCCACAACCACCGTATCAACCGCCGCTTTACCACTCTCTCTTCCTTTCTTTCCCCTCTCCCCACCCCATTTCCCAATCCACCATTTCACAGTTCCTCTTCTATTCCCTTGCCCTCTCCGCCTGGAAAACCACCGGCTTCTCCACTTGGTCTCTCAGGGTTAACCCCAGTAGCGGCAATTTGCACCCTACTGAAGCCTACATCGTTGCCCCACCCATACCCTCTATCTCTGATTCCGCTTTTGTCGCTCATTATGCCCCAAAGGAGCATTCTTTGGAACTCAGAGCCCAAATCCCATCTGGGTTTTTCCCCAAGTTTTTTCCACCCAATTCGTTTCTTGTTGGGTTGTCCTCGGTTTTCTGGCGTGAGGCTTGGAAGTACGGGGAACGCGCGTTCAGGTACTGTAACCATGATGTTGGTCATGCCATTGGGGCAGTTGCCATGGCTGCTGCGAGTCTTGGTTGGGATGTGAAGGTTTTGGATACCTTGGGGTGTGAGGAGTTGAAGAGGCTCATGGGGCTTCATGTTTTCCCTGATTTTGAAATCCCGTCGCGTGTTGTTAGAGGGAAGATTCCAGAAATTGAGTTTGAGCATCCTGATTGTGTGATGCTGGTTTATCCGAGAGGGGTTGATGGATTTGATGTTAATTGGAAGGAATTAAGTGAAGCTATATTGGGGTTTGATAAGTTGGAGTGGCAGGGGAAACCTAATTACCTTAGCAAAGAGCATGTGTGTTGGGATGTTATTTATAGGACTGCTGAGGCTGCGAAGAAGCCTTTGACATTGGGGGATAAGTTCTCGGTTGAGCCGTTTCAGAGGAGTGGTGTTTGTGGGGAGGGTTTTTATAAGGGGTTAACTATGAGGGAAGTTGTTAGGAAGCGAAGGAGTGCTGTTGATATGGATGGAGTAACTAAAATTGAGAGAGATGCGTTTTATCAAATTCTGTTGCATTGTCTTCCTTCAGGTTGCATGGGTGGAGGGAAGCAAGGAAGGCAGCTGGCTTTGCCATTTCGGGCTCTTCCATGGGATGCTGAGGTGCATGCTGCTTTATTTGTTCATAGAGTGGTAGGATTGCCTGAAGGATTGTATTTCTTGGTGAGGAATAAAAATCATTTTGATGAATTGAAGAAAGCTATGCTACCTGACTTTTTGTGGACCAAACCCGAGGGCTGCCCGGATGAGCTTCCACTGTATGAACTGCTCAGATCTGATTGCCAGCAGCTTGCAAAGCAGCTTTCGTGCCACCAGTGTATCACGTTCTTGAAGGACATTGCAAGTGATGGTTGCTTCAGTCTTGGTATGTTGGCCCGGATGGAACCTACTTTGCATGAAAAGAATGTCTGGATGTATCCACGATTATTTTGGGAAACTGGAGTCCTTGGACAGGTGCTGTACCTTGAAGCACATGCTATTGGAATCTCAGCAACTGGAATTGGTTGCTTCTTTGATGACCCTGTTCATCAGCTCCTTGGCTTAAAAGACTCAACATTCCAGAGCCTCTATCATTTTACTGTTGGAGGTCCTGTCTTAGACAAGCGCATAATGAGTTTACCAGCATATCCAGGCCCTGATGTTGATGCCTAA 1968 0.4741 MPSPYPLRNLTTPSPPLLHFLPSTHFTLSFFHPPLFHSHAMMLSFSSSASSSSSVSSSSPSTSSTPQQHHEQHSQNNLNQHKLSHVLKYHNQTKHNFNHYARGPHGLDWANQPNPFRRYLSAPLISLLHPQPPYQPPLYHSLFLSFPSPHPISQSTISQFLFYSLALSAWKTTGFSTWSLRVNPSSGNLHPTEAYIVAPPIPSISDSAFVAHYAPKEHSLELRAQIPSGFFPKFFPPNSFLVGLSSVFWREAWKYGERAFRYCNHDVGHAIGAVAMAAASLGWDVKVLDTLGCEELKRLMGLHVFPDFEIPSRVVRGKIPEIEFEHPDCVMLVYPRGVDGFDVNWKELSEAILGFDKLEWQGKPNYLSKEHVCWDVIYRTAEAAKKPLTLGDKFSVEPFQRSGVCGEGFYKGLTMREVVRKRRSAVDMDGVTKIERDAFYQILLHCLPSGCMGGGKQGRQLALPFRALPWDAEVHAALFVHRVVGLPEGLYFLVRNKNHFDELKKAMLPDFLWTKPEGCPDELPLYELLRSDCQQLAKQLSCHQCITFLKDIASDGCFSLGMLARMEPTLHEKNVWMYPRLFWETGVLGQVLYLEAHAIGISATGIGCFFDDPVHQLLGLKDSTFQSLYHFTVGGPVLDKRIMSLPAYPGPDVDA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00624 655 CDD McbC_SagB-like_oxidoreductase 165 315 - -
Vimu9g00624 655 MobiDBLite consensus disorder prediction 54 77 - -
Vimu9g00624 655 PANTHER NITROREDUCTASE FAMILY PROTEIN 52 655 - -
Vimu9g00624 655 Pfam Nitroreductase family 181 303 IPR029479 -
Vimu9g00624 655 SUPERFAMILY FMN-dependent nitroreductase-like 493 639 IPR000415 GO:0016491
Vimu9g00624 655 Gene3D NADH Oxidase 407 636 IPR000415 GO:0016491
Vimu9g00624 655 SUPERFAMILY FMN-dependent nitroreductase-like 181 303 IPR000415 GO:0016491
Vimu9g00624 655 CDD McbC_SagB-like_oxidoreductase 416 635 - -
Vimu9g00624 655 Gene3D NADH Oxidase 106 311 IPR000415 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00624 Vimu-Chr9 7713388 7717615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00624 - - gmx:100791269 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00624 9 7713388 7717615 Vimu9g00624 9 7713388 7717615 ECH