Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00607 ATGTCACACATAGACAGTGCCCCTTCGACTCCAGGGAAGTTCAAGATGGAGAAAAGCACGTACTTTAATCGCGTGCGGTGGCACACCTCGCTGGCGAAGCTTGCCATGTGGTCCTTCGTGTTTTTGGGCGCGATCTTGATCTTCTTTTTCCGGTCGCCGTCGTCGACGCCGGTGCCGGCGGACCTCTCACGGAGGTCACTGAGGACCTACAACTGGGGCGGACCCGTCTGGGAGAAACGGGTCCGAGCCTCTGCCCGGGTCCGGTCCCGAAATGGGTTTGCCGTTTTGGTCACTGGAGCCGCCGGCTTCGTCGGCACCCATGTTTCTGCGGCTCTGAAACGCCGCGGTGATGGGGTTCTGGGAATTGACAATTTCAATGACTATTACGACCCTTCACTGAAACGTGCACGCCAGTTGCTTTTGGAGCGCACTGGAGTGTACATAGTTGAGGGTGATATCAATGATGAAGCACTCTTGAGGAAGCTTTTTGAGGTTGTTCCTTTCACTCACGTTATGCACTTGGCTGCTCAGGCTGGTGTGAGGTATGCCATGGAGAATCCTGGCTCTTATGTGCATAGCAACATTGCTGGTTTTGTGAATTTGCTTGAGGTTTGTAAGAGTGTGAATCCGCAACCTGCTATTGTTTGGGCATCTAGTAGCTCAGTTTATGGACTCAACACTAAGGTTCCATTCTCTGAGAGGGATAGGACTGATCAGCCTGCTAGTTTGTATGCTGCCACTAAGAAGGCTGGTGAGGAGATTGCTCACACCTATAACCATATCTATGGTCTTTCATTGACTGGCTTGAGGTTCTTCACTGTTTATGGCCCTTGGGGTAGGCCTGATATGGCTTACTTCTTCTTCACAAGGGATATTCTCAAGGGGAAGGTGATACCTATATTTGAGGCTGCCAATCATGGCACCGTTGCGAGGGATTTTACTTACATTGATGATATTGTGAGGGGTTGTCTAGGGGCTTTGGATACGGCAGAAAAAAGCACAGGGAGTGGGGGAAAGAAGAGGGGGCCTGCACAGTTGAGGGTGTTCAATTTGGGGAATACTTCACCGGTGCCGGTTAGTGATCTTGTGGGCATTTTGGAGAGGCTTCTGAAGGTTAAGGCAAAGAGGAACATAATGAGGTTGCCACGGAATGGTGATGTTCAGTTTACACATGCCAACATTAGCTACGCGCAGAGGGAGCTTGGGTATAAGCCGACCACAGATCTGCATAGTGGTTTGAAGAAATTTGTGCGGTGGTACTTGAATTACTATTCTGATGGGAAGAAAGCTGATGAGTGA 1299 0.5019 MSHIDSAPSTPGKFKMEKSTYFNRVRWHTSLAKLAMWSFVFLGAILIFFFRSPSSTPVPADLSRRSLRTYNWGGPVWEKRVRASARVRSRNGFAVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQLLLERTGVYIVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPAIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKVIPIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVGILERLLKVKAKRNIMRLPRNGDVQFTHANISYAQRELGYKPTTDLHSGLKKFVRWYLNYYSDGKKADE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00607 432 PANTHER EPIMERASE-RELATED 77 425 - -
Vimu9g00607 432 PRINTS Nucleotide sugar epimerase signature 346 361 - -
Vimu9g00607 432 PRINTS Nucleotide sugar epimerase signature 386 403 - -
Vimu9g00607 432 PRINTS Nucleotide sugar epimerase signature 121 137 - -
Vimu9g00607 432 PRINTS Nucleotide sugar epimerase signature 311 326 - -
Vimu9g00607 432 Pfam NAD dependent epimerase/dehydratase family 95 332 IPR001509 -
Vimu9g00607 432 FunFam UDP-glucuronate 4-epimerase 3 94 425 - -
Vimu9g00607 432 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 424 IPR036291 -
Vimu9g00607 432 Gene3D - 94 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00607 Vimu-Chr9 7420972 7422270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00607 1 430 Miscellaneous Gene Families AT4G00110 86.744 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00607 K08679 - gmx:100788739 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00607 9 7420972 7422270 Vimu9g00607 9 7420972 7422270 ECH