Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00599 ATGATGGCTGAGGATCTCGGTGTGGAGGCGAAGGAGGCAGCAGTTCGCGAGGTCGCGAAGCTGTTGCCTCTGCCGGACCTGCTTCATTCGATCTCATCCATCAAGGCTGATTACATTTCGCGCCAACAGGCCAATGATGCACAACTCAGTACAATGGTTGCTGAGCAGGGTAGCAGCTGGCTTACACATGTGCATGTGATAGCAACAAAGTTCTGGTGTGAGAGGTTCAGCAGGGCCTCCTCTGACAATGGGTCTTTGGGATCTAGCCAATGTGGGGAGTGCTGTTTTGTTGGGGCAGAGAACAGGTTGTCTGCAATGAAGGAGGTTGGGATAGATACAAATGCCTCAGTTATGATGGCTAGGCTTAGATGCCATAATCAGGTTGAGCAGTCACAGGCAGGACTAAAATCACTATCCTTATCCGAAAACACAATAAATCAGCTTCGTGAAAACTTTGTCTCTATTGAGAAGTTATGTCAGGAATGCCAAACATTAATTGACAACCACGATCAGATAAAGTTACTCAGCAATGCAAGAAATAACTTAAACACAACCTTGAAGGATGTTGAAGGTATGATGTCTATCTCTGTTGAGGCAGCAGAAGCTCGAGATTCTTTGAGTGATGACAAAGAAATTGTCAACACTTATGAGAGGTTAACTGCATTGGATGGAAAACGAAGGTTTGCGTTGGCAGCTGCAGCATCTCACAAGGAAGAAGTTGGAAGGCTAAGAGAATATTTTGAAGATGTAGATCGAACCTGGGAGACCTTTGAGAAAACGCTATGGGGACATATTTCCAATTTTTATAAACTTTCTAAAGAAAGCCCACAGACATTAGTTCGAGCTTTACGGTATGTTGTTGATTGTCAATTGCACTTATTTTTTCCCCAGTCAATTGCAGAAGAAGCAGCAGAGGCTGAAGGGGATGGTGACATTGCACCAGTTGCAAATCCTCGCAAGAGCGGCATAAAGTCGACAAACACAATGGCTTCTTCAAAAAATTTAACACAACAAAAACTAAAGGTTCAGGGGAAAGGCTATAAGGATAAATGCTATGAACAAATAAGGAAGACTGTAGAAGGACGGTTTAACAAGCTTCTCACTGAGTATGTGTTTGAGGACTTGAAAGCAGCTTTAGAGGAAGCACGAGCGATTGGTGAAGAGCTTGGAGATGTCTATGACTACGTTGCCCCTTGCTTTCCTCCAAGATATGAAATATTCCAACTGATGGTAAATCTTTATACTGAGAGGTTTATTCAGATGCTAAGATTACTCAGTGACAGGGCAAATGAATTAACGAACATTGAGATTTTAAAGGTAACTGGTTGGGTGGTTGAATACCAAGATAATCTGATTGGGCTTGGAGTTGATGAGTCTCTAGCCCAAGTGTGCTCTGAGAGTGGTTCAATGGATCCTCTAATGAACTCCTATGTTGAGAGAATGCAAGCTACAACTAGGAAATGGTACTTGAACATTTTAGAGGCAGATAGAACACAGCCCCCAAAGAAAACTGAAGATGGGAAGTTATATACCCCTGCTGCTGTTGATCTCTTCAGGATACTTGGTGAACAAGTACAAATTGTTCGGGATAATAGCACCGATCTCATGTTATACAGAATTGCCCTGGCAACCATTCAGGTAATGATTGATTTTCAAGCAGCTGAAAAGAAGAGACTTGAAGAGCCAGCTTCTGAAATTGGTCTGGAACCTTTATGTGCTATGATTAACAACAATTTACGTTGCTATGACCTTGCAATGGAGCTAAGTAATAGCACCATAGAAGCCCTTCCACAGAACTATGCTGATCAGGTTAATTTTGAAGATACCTGTAAGGGTTTTCTTGAGGTAGCTAAGGAAGCTGTGCATCAAACGGTTAGTGTGATATTTGAAGATCCTGGTGTCCAGGAGTTACTGGTGAAGCTATACCAGAAAGAATGGAGTGAGGGGCAGGTTACTGAGTACTTGGTCGCAACATTTGGTGATTATTTTGGCGATGTTAAAATGTATATTGAAGAGCGATCTTTTAGGAGATTTGTTGAAGCCTGTCTGGAAGAAACAGTGATTGTTTATGTCGATCATCTTTTAACACAGAAAAATTACATTAAGGAAGAAACTATTGAACGGATGAGGCTAGATGAGGAGGTTATCATGGATTTCTTTAGGGAACATATCAGTGTTTCTAAAGTTGAAAATAGAGTGAGTGTACTTAGTGACTTGAGGGAACTTGCTTCAGCAGAGAGCCTGGATACATTCACACTCATCTATACCAATATACTTGAACATCAACCTGACTGCCCGCCTGAAGTTGTTGAGAAACTTGTTAATCTACGAGAAGGCATTCCTCGGAAAGATGCCAAAGAGGTCATCCAAGAGTGCAAAGAGATATATGAGAATTCACTTGTTGACGGAAGACCTCCAAAGGTTGGTTTCGTTTTCCGACGAGTGAAGTGCTTAACAGCATCCAAGGGAGGACTATGGCGTAAACTCACTTGA 2493 0.4212 MMAEDLGVEAKEAAVREVAKLLPLPDLLHSISSIKADYISRQQANDAQLSTMVAEQGSSWLTHVHVIATKFWCERFSRASSDNGSLGSSQCGECCFVGAENRLSAMKEVGIDTNASVMMARLRCHNQVEQSQAGLKSLSLSENTINQLRENFVSIEKLCQECQTLIDNHDQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLSDDKEIVNTYERLTALDGKRRFALAAAASHKEEVGRLREYFEDVDRTWETFEKTLWGHISNFYKLSKESPQTLVRALRYVVDCQLHLFFPQSIAEEAAEAEGDGDIAPVANPRKSGIKSTNTMASSKNLTQQKLKVQGKGYKDKCYEQIRKTVEGRFNKLLTEYVFEDLKAALEEARAIGEELGDVYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGSMDPLMNSYVERMQATTRKWYLNILEADRTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDLMLYRIALATIQVMIDFQAAEKKRLEEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYADQVNFEDTCKGFLEVAKEAVHQTVSVIFEDPGVQELLVKLYQKEWSEGQVTEYLVATFGDYFGDVKMYIEERSFRRFVEACLEETVIVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVSVLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVNLREGIPRKDAKEVIQECKEIYENSLVDGRPPKVGFVFRRVKCLTASKGGLWRKLT 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00599 830 Pfam Exocyst complex component Sec6 247 814 IPR010326 GO:0000145|GO:0006887
Vimu9g00599 830 Gene3D - 642 807 IPR042532 -
Vimu9g00599 830 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 3 817 IPR010326 GO:0000145|GO:0006887
Vimu9g00599 830 Gene3D - 467 636 - -
Vimu9g00599 830 MobiDBLite consensus disorder prediction 306 326 - -
Vimu9g00599 830 FunFam Exocyst complex component SEC6 467 636 - -
Vimu9g00599 830 FunFam Exocyst complex component SEC6 642 815 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00599 K06110 - gmx:100799529 1312.75