Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00589 ATGAAGCTTGTTTGGTCCCCAGAAACAGCCTTAAAAGCTTACATAGACACCGTTAAATCAGTAAGCACCCTTTACATCAAGATTCAAGAACCATGTATTTCAATCAGTCACACAGTTTTCTTGCTTCTTAGGTCTATATTTTCTGCTTGTGAGAAATTCAAGGAATCTGGGGTACCGGAGTTGCTCTCAGCCATGGCTGCAGGATTTAACACAAAGTTCATAGTGGAATCATGGTGCTACGGTGGTCCTATAGCGGCAAGCGTGGGCTTAGCAGTTGCTGCTCGCAACACGGGTGCACGGCACGTGTGCATAGTCCCGGATGAAAAGTCGAGGGTGCGGTACATAGAGGCCCTGGCGGAGATGGGGGTGTCTCCGCCGCCGGAGGTGGTGGCGGGGGAGGCGGAGGAGACGGTGTCGCGGCTGGCGGGGCTGGACTTTCTGTTGGTGGATTGCAAGAGGAGGGAGTTCGCTAGGGTTCTAAGGGTGGCCAAAGTTAGTCCTAAAGGAGCAGTTTTAGCATGCAAGAATGCATGGCAGAGAAATTCGCGTGGCGGGTTCAGATGGAGCGTGGTGCTTCAAAGGGGAGTGCGAGTGGTTAGGTCAGTGTTCCTCCCTGTTGGGAAGGGTTTGGATATTGCATACATAGGAGGTAGTAGAAGTGGTGCACCACCACCTCCACCACCACAAAAAACTGCTTCAAATGGTGGTCCTTATCGTTGGATCAAGCACATAGACCAAAAATCTGGAGAAGAACACCTCTTCAGGGAGTGA 771 0.5123 MKLVWSPETALKAYIDTVKSVSTLYIKIQEPCISISHTVFLLLRSIFSACEKFKESGVPELLSAMAAGFNTKFIVESWCYGGPIAASVGLAVAARNTGARHVCIVPDEKSRVRYIEALAEMGVSPPPEVVAGEAEETVSRLAGLDFLLVDCKRREFARVLRVAKVSPKGAVLACKNAWQRNSRGGFRWSVVLQRGVRVVRSVFLPVGKGLDIAYIGGSRSGAPPPPPPQKTASNGGPYRWIKHIDQKSGEEHLFRE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00589 256 Gene3D Vaccinia Virus protein VP39 45 215 IPR029063 -
Vimu9g00589 256 Pfam Protein of unknown function (DUF1442) 48 255 IPR009902 -
Vimu9g00589 256 Pfam Protein of unknown function (DUF1442) 1 23 IPR009902 -
Vimu9g00589 256 MobiDBLite consensus disorder prediction 217 239 - -
Vimu9g00589 256 PANTHER DUF1442 FAMILY PROTEIN 1 255 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00589 Vimu-Chr9 7169554 7170429 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00589 - - gmx:100794419 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00589 9 7169554 7170429 Vimu9g00589 9 7169554 7170429 ECH