Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00583 ATGTCTTCACTGTCACTTTATAAGGCCAAAAGAGACAAAGAACCTGATGTAGTAGAGTTCATATCTGCTCTTGCAGCAGGAAACAATGCACAACTCATGGTGGTGGCCGGTGCCGGTGTGGCCGGTTCAGCCACCCTTGCTCTGGCTGCAGCGGCTCATCAAACTGGTGGCCGTGTGATATGTGTATGTTGTGACCAAATAGAGACAAAACCATTGAGAAAAGATCTAGGAGTTTATGCAGATCGTGTTGAGTTTGTTGTAGGAGATGTGAGAAGGCTTCTGGTAGGAGATTACAAAGGAGCTGATTTTGTGCTTGTGGATTGTGACATGAGTAATGCAAGGGAAACTTTTCTAGCAGCATTTAAAGGTGCCAGCAGAGATGGTGCAGTTGTGGTAGGATACAATGTTAAGCACAGAGCTTCGAGATGGAGACAACTAAGAGCATCGTTTTTACCCATTGGAGAAGGGTTGTTAGTGGCCAAAATAGATCCAAATTTGAAGGGTAATAATAATCAAAGGGTTGTCCGAAGGAGGAGTCGTTGGATTGTTCAAGTGGATAACTGCACTGGAGAGGAACATATTTTTAGGGTCACCTCTCCTCATAAGAAAGTGCAGATTGAAGTCTAA 627 0.4418 MSSLSLYKAKRDKEPDVVEFISALAAGNNAQLMVVAGAGVAGSATLALAAAAHQTGGRVICVCCDQIETKPLRKDLGVYADRVEFVVGDVRRLLVGDYKGADFVLVDCDMSNARETFLAAFKGASRDGAVVVGYNVKHRASRWRQLRASFLPIGEGLLVAKIDPNLKGNNNQRVVRRRSRWIVQVDNCTGEEHIFRVTSPHKKVQIEV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00583 208 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 160 IPR029063 -
Vimu9g00583 208 Gene3D Vaccinia Virus protein VP39 4 163 IPR029063 -
Vimu9g00583 208 Pfam Protein of unknown function (DUF1442) 9 196 IPR009902 -
Vimu9g00583 208 PANTHER DUF1442 FAMILY PROTEIN 7 196 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00583 Vimu-Chr9 7106972 7107628 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00583 - - pvu:PHAVU_010G083400g 337.806