Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00571 ATGCATAGATCTGGAGCTACGATGGCGTGGAACGTTTTCAAGTTCTGCACTGCTCTGCGAGGATTGGGCTCGATCATGATTCTGTTGGTTCTTGGGGTCGTTGGTGTGACTTATTATGCTGTTGTTTTGACCAATTTTGGCCCTGCTTTGTCTGCTGGAGGACTTGATTCTCTTGTTGCCGTGCTAGTGTTGATCTTGTTTCATAGTTTGTTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACTGATCCTGGGAGCGTTCCTCCTAACTGGAGGCCTACAATTGATGAGGAAAGAGGAGAGGCTGATCCGCTGGTTGGGACGGAGTTTAGTAACGTGCAGGCTGATCCCAATCAACGGATTCGGTACTGTCGGAAGTGCAATCAGCTCAAGCCACCTCGATGCCACCATTGTTCAGTTTGTGCGTTTTATTGCTTGCAAAAGTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTAAACTGTGTTGGAGCTCTAAATTACAAGTATTTCCTTCTCTTCTTGGTATGGATGCCTTAGCTGGAGTTATTGTTTCATTATTATCTGTGCAGTTCTACACATTTCTTGAGACGACTCTGGTGACTGCATCCTTACTGCCACATTTTATTGCATTCTTTAGTGATGGAGAAATCCCTGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGTTTTAAACCTGGCCTTTGCACTAAGTGTCTTGGGATTTCTCATCATGCACATATCTTTGGTGGCTGCTAATACTACCACTATTGAGGCTTATGAGAAGAAAACTACTCCAAAATGGCGTTATGACCTTGGTCGTCGAAAAAATTTTGAGCAGGATGGCAGCAGTATCAAGGATAGGGAGGGGGGAAAGAGTCATCCAAGAATTCAAGATATTGGTGTTTCTAGTAAACCCAACATCAGAAAACCAGTTGGGGGAGTATTTCTTGACAAAGTGGCAGGCCTATGCAAGAAGGACAAGAAAGTTGGACGATCTCCCTTTTGTCTTGGGTTTTTGGAATGGACAAGAAGTACTGGTTCATTCCTTCATATTCAGATGAGGATATCCGAAAGATGCCAGCTCTACAAGGTCTTGACTATCCTTCAAAACCTGACTTTGATTCCCAATAGTTCTAAAAGCTAA 1170 0.4376 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNFGPALSAGGLDSLVAVLVLILFHSLLVMLLWSYFSVVFTDPGSVPPNWRPTIDEERGEADPLVGTEFSNVQADPNQRIRYCRKCNQLKPPRCHHCSVCAFYCLQKWALCFEDGPPLCVGSKLCWSSKLQVFPSLLGMDALAGVIVSLLSVQFYTFLETTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQDGSSIKDREGGKSHPRIQDIGVSSKPNIRKPVGGVFLDKVAGLCKKDKKVGRSPFCLGFLEWTRSTGSFLHIQMRISERCQLYKVLTILQNLTLIPNSSKS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00571 389 ProSiteProfiles DHHC domain profile. 124 154 - -
Vimu9g00571 389 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 26 144 - -
Vimu9g00571 389 MobiDBLite consensus disorder prediction 289 303 - -
Vimu9g00571 389 MobiDBLite consensus disorder prediction 289 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00571 Vimu-Chr9 6975864 6985292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00571 8 288 Lipid Metabolism Gene Families AT4G22750 57.951 2.47e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00571 K20028 - gmx:100794887 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00571 9 6975864 6985292 Vimu9g00571 9 6975864 6985292 ECH