Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00538 ATGGCGAGCGCTGTAGATGCCTCGGGAAACCCTATCCCTTCGTCGTCGGTGTTGATGGCATCGTCGAAGCACATTGGGATTCGGTGTCACTCTGAGAATTTGGAATTTCTGAAGTGCAAGAAGAAAGATCCCAACCCTGAAAAGTGTCTTCATAAGGGTCGAGAAGTTACTCGTTGTGTCCTTGGACTGTTGGGGCCATGCCAATGTCTACCTGAGTCTGGGCAAGCCCACTTTCAACCAAATTGGGCTAGGTTTTTAGGGTCAGGTCAAGCAAAGTCAAGTTGGCTTGTGTGGGTCGAGACATCGGCTTGGGGCCTTGTCAAGATGAGTAAGGTCGACCCTATGTTAGATGTTCCTTTTGTATTAAGGTTGAGAATGAGAGATTTTAGGTATCCTATGGAAAGGAACATTTTGAAAGATCTGCATCAAAAGTGCACAAAGGAGATGGATGATTATGTTGGCTGCATGTACTACCATACAAATGAATTTGACTTGTGTCGCAAAGAGCAGCAAGCATTCGAGCAAAAGTGTTCTTTGGAATGA 543 0.4549 MASAVDASGNPIPSSSVLMASSKHIGIRCHSENLEFLKCKKKDPNPEKCLHKGREVTRCVLGLLGPCQCLPESGQAHFQPNWARFLGSGQAKSSWLVWVETSAWGLVKMSKVDPMLDVPFVLRLRMRDFRYPMERNILKDLHQKCTKEMDDYVGCMYYHTNEFDLCRKEQQAFEQKCSLE 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00538 180 Pfam CHCH domain 145 177 IPR010625 -
Vimu9g00538 180 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 136 177 IPR016680 GO:0006120
Vimu9g00538 180 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 142 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00538 Vimu-Chr9 6440551 6446023 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00538 K03952 - gmx:100527451 124.405