Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00508 ATGAAAATGTTAAGAAAATATGTGATTCCACTTCTCAAATGTCTGTATTTGAAAAGATTTTACATATGCCTGAATGTGGAAAAGTTTGTGTATGAATGCGGCAATTGCATCCTGTATTCTGCTGCAGGTAGCAATGGTGTCAACCGTGAAAAGAGAACTGTACAGAAACCTGAGTCATTGGAAACTGTCATGCCCAGTGAAGAGGCGATAGCTGAATCAAGTGAAGAGTATAGCCCAAAGATAGTGGGGATTTATATGCCTCCTTCTGTTGAATATATTGTAGCTGTTCTTTCGGTACTTAGGTGTGGGGAAGCCTTCCTGCCTCTAGATCCTTTTTGGCCAAATGAAAGGATATTGTTTATGGCCTCTTCTTCAAACGTTGATCTGATTATAGGATCCCAATCTTCTTTTGGTAAAAGAAATTTGGAGAAACTTGATGAATCACATTGGCTGGTAAAGTCAAGTAGTTGTCCAGTTTTGAATTACTCCATTGACCAAAAGCTGCAAGATTGTAGTGGTCCAACAGATTTGGCATGGCCATGTGTCAATGAAAAACAAAGATCATTCTGCTATGTGATGTACACATCTGGATCAACTGGAAAACCTAAGGGAGTGTGTGGCACTGAACAAGGTAATTTACTATAG 645 0.3922 MKMLRKYVIPLLKCLYLKRFYICLNVEKFVYECGNCILYSAAGSNGVNREKRTVQKPESLETVMPSEEAIAESSEEYSPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPNERILFMASSSNVDLIIGSQSSFGKRNLEKLDESHWLVKSSSCPVLNYSIDQKLQDCSGPTDLAWPCVNEKQRSFCYVMYTSGSTGKPKGVCGTEQGNLL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00508 214 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Vimu9g00508 214 Gene3D - 80 207 - -
Vimu9g00508 214 SUPERFAMILY Acetyl-CoA synthetase-like 81 211 - -
Vimu9g00508 214 Pfam AMP-binding enzyme 81 212 IPR000873 -
Vimu9g00508 214 PANTHER BETA-ALANINE-ACTIVATING ENZYME 72 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00508 Vimu-Chr9 6018288 6019178 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00508 K00142 - var:108336788 332.413