Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00481 ATGGTGTCTCCCCGTAGCATGACCAACAGTGGAAGAGCGCAGGAAGAGGAGGCTCCGGCGAGCAGTTCAGATGTGAGGACTATGCTCCTAGAACTACAAAAGAAGCTAGATGAGTTAGAAAAGAGACATGCGGAGGAGATAGCCGCGTTGAAAGAAGAAAAAACTAAGATGAAGAGGAAGCTTGAAGAAGTGGGTCAGGATTGTTCCAAAGGTCCAAGCTTGAAGACCCCAAGGAAATTCGCCACATCAAAGAATGCTGACATGTCTCGGCATTGTCGGTATCACCGAGAGTATGGACATGAAACGGAAGAGTGTGTGGCCTTGAAAGACAAAATAGAAGAGCTTATACAAGCGGGACACCTCAGAGAGTTTGTCCAAAGAGGGGGGCATGGTGGCGAAGGCCACAAGCGACTAGTAGAGTCAAGAAGAACGGTAGAGGATGACTCTGATGACAGGACTAACTCAAGGCAACGCCGCGCCACTCGAGACAAGGATGCCATATCATCGGATTCAAGAGGGCAGAGCATCCTAAGCCAGCCGGCAAGAATGTACAAGAGTCAGTCATTTTGTCGAAGGGACACTGATGTTCTTAGTGTTCCTTTCCTTGCAATATATGAGTCTCTAATACCTCCTGAAGAAGAAAAGAAGAAGGAAAAACAAGTATTGGCATTATTGGAGAAATTAGTTAGAAAAGAATGGCCAGCAGCTAAGCTTCATCTCTATGGACCACGTGCTAATTCGTTTGGTTTTTCTAAAAGTGACATTGATGTTTGCGTTGCTATTGAGGAAGGAGGCCTGAGGAAAGCTAAGATTATAAGGAAATTGGCGGATATTTTGCGATCAGATAATCTGGAGAACGTGCAGGCATTGACAGGTGCACGGGTTCCCATAGTAAAGCTCATGGATCCAGTGACAGGAATCTCTTGTAACATATGCATTAACAAACTTCTAGCTCTTGTGAATACAAAGCTTCTTCGGGATTATGCACTCATAGATCCAAGGTTACGGCAGCTAGCCTTCATTATCAAACATTGGGCTAAGTCAAGAAGAGTCAATGAAACTTACCATAGAACTCTGTCTAGCTATGCGTATGTTTTGATGTGCATTCATTATTTACAAATGAGAAGACCTGCCATCCTTCCATGCTTGCAGGAGATGGAGACAACGTATTCTGTGACTGTGGATGATATTAATTGTGCTTTCTTTGATAAAGTTGAAAAACTTAGAGATTTTGGTCGCCACAACAAGGAAACAATTGCTCAGCTTGTGCGGGGATTTTTCCACTATTGGGCATATTGTCATGATTATGCAAATTCTGTTATATCTGTACGCACAGGAAGCATTATCAGCAAACGAGAGAAGGACTGGATTAGAGGGATTGACAATGATCGGCATTTGATATGTATAGAGGATCCTTTTGAAACATCTCATGATCTTGGGAGAGTGGTAGATGAATATACCATCAAAGTTCTGAGGGAAGAATTTGAACGTGCTGCTGAAATTATGCAGAATGATCCAAATCCGTGTATTAAACTTTTTAAGCTCTATGTTCCCAGTTGA 1560 0.4301 MVSPRSMTNSGRAQEEEAPASSSDVRTMLLELQKKLDELEKRHAEEIAALKEEKTKMKRKLEEVGQDCSKGPSLKTPRKFATSKNADMSRHCRYHREYGHETEECVALKDKIEELIQAGHLREFVQRGGHGGEGHKRLVESRRTVEDDSDDRTNSRQRRATRDKDAISSDSRGQSILSQPARMYKSQSFCRRDTDVLSVPFLAIYESLIPPEEEKKKEKQVLALLEKLVRKEWPAAKLHLYGPRANSFGFSKSDIDVCVAIEEGGLRKAKIIRKLADILRSDNLENVQALTGARVPIVKLMDPVTGISCNICINKLLALVNTKLLRDYALIDPRLRQLAFIIKHWAKSRRVNETYHRTLSSYAYVLMCIHYLQMRRPAILPCLQEMETTYSVTVDDINCAFFDKVEKLRDFGRHNKETIAQLVRGFFHYWAYCHDYANSVISVRTGSIISKREKDWIRGIDNDRHLICIEDPFETSHDLGRVVDEYTIKVLREEFERAAEIMQNDPNPCIKLFKLYVPS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00481 519 MobiDBLite consensus disorder prediction 61 82 - -
Vimu9g00481 519 Coils Coil 22 67 - -
Vimu9g00481 519 SUPERFAMILY Nucleotidyltransferase 198 329 IPR043519 -
Vimu9g00481 519 CDD NT_PAP_TUTase 220 329 - -
Vimu9g00481 519 MobiDBLite consensus disorder prediction 126 180 - -
Vimu9g00481 519 Pfam TUTase nucleotidyltransferase domain 212 311 IPR045100 GO:0016779
Vimu9g00481 519 Pfam Cid1 family poly A polymerase 419 477 IPR002058 -
Vimu9g00481 519 MobiDBLite consensus disorder prediction 1 21 - -
Vimu9g00481 519 FunFam Terminal uridylyltransferase cid1 332 500 - -
Vimu9g00481 519 PANTHER POLY A POLYMERASE CID PAP -RELATED 66 507 - -
Vimu9g00481 519 FunFam Terminal uridylyltransferase cid1 218 331 - -
Vimu9g00481 519 MobiDBLite consensus disorder prediction 126 169 - -
Vimu9g00481 519 Gene3D Beta Polymerase, domain 2 219 331 IPR043519 -
Vimu9g00481 519 MobiDBLite consensus disorder prediction 1 25 - -
Vimu9g00481 519 Gene3D - 332 500 - -
Vimu9g00481 519 SUPERFAMILY PAP/OAS1 substrate-binding domain 333 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00481 Vimu-Chr9 5711665 5715860 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00481 - - vum:124847023 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00481 9 5711665 5715860 Vimu9g00481 9 5711665 5715860 ECH