Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00480 ATGCACTCACTCCCACACCAAACTTCACAACCGCCACCAATGGAAGACCAAAACCAGTGTACGACAGAAGACCAACAGATGCAAAACCTTAATCTCCCCGAAGTCCTTCTTCATGGTCCCCCAGGTTTTTCCTCTGTTCTCCAACCACCCTATTCCCAAAAGTTCCATCTTTTAAACCACTCTTCGCTTCCACTTCACCAGTTTGCGGCCACCCACCCCCACCACTGCGCCGCCGTGGCCGCCGTCCTCTGCGACGGGGGCTACCCCCTCACCGCCGACATGCTTAGTCTCCTCCCTTCGCTCCGCCTCGTTGTCACCGCCAGTGCCGGCACCGATCACGTCGACCTGGACGAGTGCCGCCGCCGCGGAATTCAGGTTGCTGGTGCCGGAAATTTGTTTTCCGAGGACGTGGCCGATTTGGCGGTGGCTTTGTTGATCGACGTGGTGATGAAGATTTCCGCAGCGGATCGGAGTTTGAGAAAACGACACGTTGATTCACGAGCTTTTACGCTTGCTTCCAAGGTAACAGGAAAGAGAGTTGGAATAGTAGGGTTGGGAAGAATAGGGTTGGAGGTGGCACATAGGCTTGAGGCCTTGGAATGCATGGTATCCTACAACTCTAGGAAGCAGAAACCCTTTGTTCCATACCCTTTCTATTCTACTGTTCTTGAACTTGCCACTAACACCAATGTCCTTGTTCTCTGTTGTTCCCTCAATGACCAAACACGCCACATGATCAACAGAGAAGTCATGCTGGCACTGGGAAAAGGAGGAGTTATTGTGAATGTGGGAAGAGGAGCTTTGATAGATCAAAAACAACTCATCAACTGTTTGATGGAAGGTGAAATTGGTGGTGCTGGTTTGGATGTCTTTGAGAATGAGCCTCTTGTTGATGAACACTTCTTTTCCTTGGATAATGTAGTTCTATCACCACATGCTGGTTTTTCCACTTTAGACTCTTATCTTGCTATTTGCCAACTTCTCGGACGTAATTTGGAAGCTTTTTTCTCTAATAACACTCTCATTACTCCTGTCATTTAG 1041 0.4918 MHSLPHQTSQPPPMEDQNQCTTEDQQMQNLNLPEVLLHGPPGFSSVLQPPYSQKFHLLNHSSLPLHQFAATHPHHCAAVAAVLCDGGYPLTADMLSLLPSLRLVVTASAGTDHVDLDECRRRGIQVAGAGNLFSEDVADLAVALLIDVVMKISAADRSLRKRHVDSRAFTLASKVTGKRVGIVGLGRIGLEVAHRLEALECMVSYNSRKQKPFVPYPFYSTVLELATNTNVLVLCCSLNDQTRHMINREVMLALGKGGVIVNVGRGALIDQKQLINCLMEGEIGGAGLDVFENEPLVDEHFFSLDNVVLSPHAGFSTLDSYLAICQLLGRNLEAFFSNNTLITPVI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00480 346 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 142 314 IPR006140 GO:0051287
Vimu9g00480 346 Gene3D - 134 317 - -
Vimu9g00480 346 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 33 341 - -
Vimu9g00480 346 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 76 345 IPR006139 GO:0016616|GO:0051287
Vimu9g00480 346 CDD HPPR 33 337 - -
Vimu9g00480 346 Gene3D - 70 339 - -
Vimu9g00480 346 FunFam Putative 2-hydroxyacid dehydrogenase 134 317 - -
Vimu9g00480 346 MobiDBLite consensus disorder prediction 1 23 - -
Vimu9g00480 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 315 IPR036291 -
Vimu9g00480 346 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 73 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00480 Vimu-Chr9 5705827 5711401 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00480 K15919 - gmx:100777313 545.814