Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00479 ATGACAGAAGAAGCAAACCATAGCAGCGGTGACATGAAAGGTCTTCCCAAAGTGCTAGTTCTGGGTCCTCCTTTTTGCTTCTCATCACTTCAACCTCTTTACTCTCACAAATTCCATTTTCTCAAATCTCACCTCTCAGATCTCTCGCTTCAACACTTCCTTCAACTCCACCACCCTCCCTCTATTACCGCTATTATCTGCGACTCCGGCTACTCCGTAACCGCTGAAGTCCTCCGCCTCCTCCCATCGCTCCGCCTCCTCGTCACCACCAGCGCCGGAACAAATCACATCGACCTCCGTGAGTGTCGCCGCCGCGGAATCCAAGTCGCCGGTGCCGGAGGTATGTTCTCGGAGGATGTGGCAGATATGGCGGTGGCTCTGCTCATTGACGGAATGAGGAAAATCTCAGCGGCAGATCGGTGGTTAAGGACGCAGAATCGCCACAATGCGCCCTGGCATTTATTCCCATTAGGGTCCAAGTTATCAGGGAAGCAAGTTGGGATTATTGGATTGGGAAGCATTGGCATGGAAGTGGCGAAAAGGCTCGAGTCTTTTGGTTGCATAATCGCATACAACTCTAAGCATAAAAAAACTGCAGTGTCATATCCTTTCTATTCCAGTGTTGTTGAGCTTGCAACTACTTGCGACGTTCTTGTGCTCTGTTGTGAACTAAATGAGCAAACAAAACACATAATTAACAGGGAAGTCATTCTGGCGTTAGGAAAAGGGGGATTTATTGTGAATGTTGGAAGAGGGGGTCTTATTGATGAAAAGGAATTGGTAAAGTGTTTGATGGAAGGTGAAATTGGAGGTGCTGGTTTGGATGTTTTTGAGAACGAGCCTCGTGTTCCTCAAGAGCTCTTTGAAATGAATAATGTGGTTTTGTCTCCACATGCTGCTGCTATTACTGCGGAATCATTCATGAATATGTGTGAACTTGCTGGAGGGAATTTAGAAGCCTTTTTCTCAAAAAAGCCCCTAATCACTCCAGTTATGTTGCCTGAATAA 1008 0.4673 MTEEANHSSGDMKGLPKVLVLGPPFCFSSLQPLYSHKFHFLKSHLSDLSLQHFLQLHHPPSITAIICDSGYSVTAEVLRLLPSLRLLVTTSAGTNHIDLRECRRRGIQVAGAGGMFSEDVADMAVALLIDGMRKISAADRWLRTQNRHNAPWHLFPLGSKLSGKQVGIIGLGSIGMEVAKRLESFGCIIAYNSKHKKTAVSYPFYSSVVELATTCDVLVLCCELNEQTKHIINREVILALGKGGFIVNVGRGGLIDEKELVKCLMEGEIGGAGLDVFENEPRVPQELFEMNNVVLSPHAAAITAESFMNMCELAGGNLEAFFSKKPLITPVMLPE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00479 335 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 15 327 - -
Vimu9g00479 335 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 300 IPR006140 GO:0051287
Vimu9g00479 335 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 62 331 IPR006139 GO:0016616|GO:0051287
Vimu9g00479 335 CDD HPPR 16 323 - -
Vimu9g00479 335 Gene3D - 117 303 - -
Vimu9g00479 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 301 IPR036291 -
Vimu9g00479 335 Gene3D - 51 326 - -
Vimu9g00479 335 FunFam Putative 2-hydroxyacid dehydrogenase 117 303 - -
Vimu9g00479 335 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 45 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00479 Vimu-Chr9 5695755 5698627 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00479 K15919 - gmx:100776772 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00479 9 5695755 5698627 Vimu9g00479 9 5695755 5698627 ECH