Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00476 ATGGAAATGGAAGACAAGCACAACCTCAAAGATAATAAGGAACTTCAACCACTCCTAGTGTTTGGTCCTCCAATAATCTTCCCAATTTTTGAAGCTGAAAACTCTGACAAGTACCGTTTCCTCAAAGCTTTCTCCTCACAAGTTCCTCTACACCAATTCCTCACTGAGCAAAAGGTTGACCCGTCATCCATTCAAGCCATATTGTGCAACCCTGCACAGAAGGTCTCAGCAGATGCCATCCGGCTCCTCCCATCACTCCGCATCATTGTGACCACCAGCGCTGGAACCGACCACATAGACTTGGTTGAATGCAGCCGTCATAGTATTCAGGTTGCCTGTGTTGCTGGAGATCATGCAGGGGATGTTGCTGATATGGCTGTTGGGTTGTTGCTTGATGTAGTGTGCAAAATTTCTGCCGCTGATCGACATGTTCGGAAACGGGGTCCCTCTATGCCCTTGAATGATTTTTTTGGTTACAAGCTAAAAGGAAAGCGAGTAGGGATTGTTGGATTGGGAAAAATTGGCACAGCAGTTGCTGAAAGGCTTGAGGCATTCGGTTGCAGAATGATGTACAATTCAAGAAACGAGAAGCCATTTATTCCATACCCCTTTTATGCTAATGTTGTTGAGCTTGCTGGTGATAGTGATGTTCTTGTGGTTTGTTGCCCATTAAATGAAGAAACAAGGCACATAGTGAATAGGGAAGTGATGTTGGCGTTGGGGAAAGATGGATTTATTGTGAATGTTGGGCGTGGAGCTCTGATTGATGAAAAGGAATTGGTTAAGTGTTTGATGAAAGGGGAGATAGGGGGTGCTGGTTTGGATGTGTTTGAGAATGAGCCTATTGTTCCCACTGATCTCTTTTCTTTGGATAATGTGGTCCTCTCCCCACATGCTTCTTCATTAACTTCAGATGGTTTGGATGAATCATCTAAACTTGCAGCAGAAGCTCTGCAATGCGAGTTGGTTTGTGTATTAAATTTGAGGCAGAAGTACATGTCATCTCATTTCTCCTTTCTCATTCGTGGGCTATTGTTTGTGCTTGAGAAGTGTTGCTTGTTATGTGATGAGTGCATCGAAGTCCAGAGTGCAGTGAGAGATGAAGAATTTTGGTGTATTCGATTCTCGTTTATTGTATTCGGTTCCGGCAAGCTTCACCAGTTTCCTCCATGCTTTGTTTTACGAAGGATAAGTTGTGGCTTTGGTAAGCTAGTGAAGGCGTTGAAGACTGTGGTGGTAGCTGGTGGAGGTGTTGTGAGTGAAGACTAG 1269 0.4421 MEMEDKHNLKDNKELQPLLVFGPPIIFPIFEAENSDKYRFLKAFSSQVPLHQFLTEQKVDPSSIQAILCNPAQKVSADAIRLLPSLRIIVTTSAGTDHIDLVECSRHSIQVACVAGDHAGDVADMAVGLLLDVVCKISAADRHVRKRGPSMPLNDFFGYKLKGKRVGIVGLGKIGTAVAERLEAFGCRMMYNSRNEKPFIPYPFYANVVELAGDSDVLVVCCPLNEETRHIVNREVMLALGKDGFIVNVGRGALIDEKELVKCLMKGEIGGAGLDVFENEPIVPTDLFSLDNVVLSPHASSLTSDGLDESSKLAAEALQCELVCVLNLRQKYMSSHFSFLIRGLLFVLEKCCLLCDECIEVQSAVRDEEFWCIRFSFIVFGSGKLHQFPPCFVLRRISCGFGKLVKALKTVVVAGGGVVSED 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00476 422 Gene3D - 119 303 - -
Vimu9g00476 422 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 26 319 - -
Vimu9g00476 422 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 127 299 IPR006140 GO:0051287
Vimu9g00476 422 CDD HPPR 16 319 - -
Vimu9g00476 422 FunFam Putative 2-hydroxyacid dehydrogenase 119 303 - -
Vimu9g00476 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 121 301 IPR036291 -
Vimu9g00476 422 Gene3D - 42 319 - -
Vimu9g00476 422 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 63 146 - -
Vimu9g00476 422 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 40 126 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00476 Vimu-Chr9 5669694 5673851 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00476 K15919 - gmx:100812243 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00476 9 5669694 5673851 Vimu9g00476 9 5669694 5673851 ECH