Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00473 ATGGAAAACATTATGAAGAAATTGGGGCATTGTGAGTACCCAAATTGTCCTTGTTCTGTCCTTTACCAATTTCCAGGAGCTCAACCATCAATGGCAATGGAAGACAAGCACAACCTCAAAGATAATAAGGAGCTTCAACCACTCCTAGTGTTTGGTCCTCCAACAATCTTCCCAGTTTTTGAAGCTGAAAACTCTGACAAGTACCGTTTCCTCAAAGCTTTCTCCTCACAAGTTCCTCTCCACCAATTCCTCACTGAGCAAAAGGTTGACCCGTCATCCATTCAAGCCATATTGTGCAACCCTGCACAGAAGGTCTCAGCAGATGCCATCCGGCTCCTCCCATCACTCCGCATCATTGTGACCCCCAGCGCTGGAACCGACCACATAGACTTGGTTGAATGCAGTCGTCATAGTATTCAGGTTGCCTCTACTGCTGGAGATCATGCCGGGGATATTGCTGATATGGCTGTTGGGTTGTTGCTTGATGTAGTATGCAAAATTTCTTCTGCTGATCGACATGTTCGGAAACGGGGTCCGTCTATGCCCTTCAATCTTTCTTTTGGTTTTAAGCTAAAAGGAAAGCGAGTAGGGATTATTGGATTGGGGAAAATTGGTACAGCAGTTGCTAAAAGGCTTGAGGCATTCGGTTGTAGAATGATGTACAATTCAAAAAACGAGAAGCCATTCGTTTCATACCCCTTTTATTCGAATGTTGTTGAGCTTGCTGGTGATAGTGATGTCCTTGTGCTTTGTTGCGCATTAAATGAAGAAACAAGGCATATAGTGAATAGGGAAGTGATGTTGGCGTTGGGGAAAGATGGATTTATTGTGAATGTAGGGCGTGGAGCTCTGATTGATGAAAAGGAATTGGTGCAGTGTTTGATGAAAGGGGAGATAGGGGGTGCTGGTTTGGATGTGTTTGAGAATGAGCCTATTGTTCCCACTGATCTCTTTTCTTTGGATAATGTGGTCCTCTCCCCACATAATTCTTCATTTACTTCAGATCGTTTCCATGAATCATGTAAACTTGCAGCAGAAACTCTGCAAGTTTTCTTTTCAAGTAGCAGCTAG 1071 0.4379 MENIMKKLGHCEYPNCPCSVLYQFPGAQPSMAMEDKHNLKDNKELQPLLVFGPPTIFPVFEAENSDKYRFLKAFSSQVPLHQFLTEQKVDPSSIQAILCNPAQKVSADAIRLLPSLRIIVTPSAGTDHIDLVECSRHSIQVASTAGDHAGDIADMAVGLLLDVVCKISSADRHVRKRGPSMPFNLSFGFKLKGKRVGIIGLGKIGTAVAKRLEAFGCRMMYNSKNEKPFVSYPFYSNVVELAGDSDVLVLCCALNEETRHIVNREVMLALGKDGFIVNVGRGALIDEKELVQCLMKGEIGGAGLDVFENEPIVPTDLFSLDNVVLSPHNSSFTSDRFHESCKLAAETLQVFFSSSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00473 356 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 53 353 - -
Vimu9g00473 356 CDD HPPR 46 353 - -
Vimu9g00473 356 Gene3D - 149 333 - -
Vimu9g00473 356 FunFam Putative 2-hydroxyacid dehydrogenase 149 333 - -
Vimu9g00473 356 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 158 329 IPR006140 GO:0051287
Vimu9g00473 356 Gene3D - 72 353 - -
Vimu9g00473 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 331 IPR036291 -
Vimu9g00473 356 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 93 176 - -
Vimu9g00473 356 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 70 157 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00473 Vimu-Chr9 5651256 5652978 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00473 K15919 - gmx:100812243 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00473 9 5651256 5652978 Vimu9g00473 9 5651256 5652978 ECH