Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00468 ATGAGCGACGGAGGAAAACGACAAGGTGGAAGAGCGTTGCCTCCGCCACCACGCGGCCCTCCTCCTCCGCCTCCCTCTCGCCCTCGCCTCGAACCTGTCGATCGTGAAAAGACATGTCCGTTGCTGCTGCGAGTGTTCACCAAGATCGGAGGTCACCACTCGATGGAAGACTTCGCCGTCAGAGGAAAAGAGCCAAAGGACGAAGTCCAGATTTACACTTGGAAGGACGCTACTCTCCGAGAACTCACCGATCTTGTTAAAGAAGTGGCCCCCGCTGCGAGAAGAAGAAACGCCAAGCTCTCATTCGCCTTCGTGTTTCCTGATAAAAACGGCCGGTTCAAAGTTCAAGAGGTGGGTAAGACATTATCTTATGGAAATGGAAGATTGGATGATGGCAAGGCTTTAGCTGAACTTGGTTTTGAGATCGGTGATTACTTGGATGTGGCTATTCTGTAG 456 0.5197 MSDGGKRQGGRALPPPPRGPPPPPPSRPRLEPVDREKTCPLLLRVFTKIGGHHSMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSYGNGRLDDGKALAELGFEIGDYLDVAIL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00468 151 Pfam Sin3 associated polypeptide p18 (SAP18) 32 150 IPR010516 -
Vimu9g00468 151 PANTHER SAP18 19 151 IPR010516 -
Vimu9g00468 151 Gene3D ASAP complex, SAP18 subunit 25 151 IPR042534 -
Vimu9g00468 151 MobiDBLite consensus disorder prediction 1 35 - -
Vimu9g00468 151 MobiDBLite consensus disorder prediction 13 28 - -
Vimu9g00468 151 FunFam Histone deacetylase complex subunit SAP18 24 151 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00468 K14324 - gmx:100526922 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00468 9 5574060 5576378 Vimu9g00468 9 5574060 5576378 ECH