Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00446 ATGCAGCTGACGCTTGAATTCGGTGGAGGATTAGAACTTCTTTGTGACTCTAAGAAGATTCATAATGTCAATATTGAGCAACAGAATGGAGAAGGCAAGTTAATCATGAAAGATTTGCTTTCTTGGGTACGGACAAACTTGATTAAGGAGAGGCCTGAGATGTTTATGAAAGGAGACACTGTGAGACCTGGAGTTCTTGTCCTGGTGAATGACTGTGATTGGGAACTAAGTGGTCAGCTGGACACATCACTGGAAGAGAAAGATGTTGTGGCTGCAACGTTGTCATTCCCATCCAAGGCTGTCTCCAGAGTAACCTCCTCTCCATCTGCTCCCATCCAAGTGGATGATCATCACAAAAGAAAACGAACGCAAACATGGCATAAACACAAGCAATTGCAAGGTCGAGCTATGGCGGGCCATGCACCCATGGTGGCTTGTGATACTTGGGCTCCCCCGCCCTGCCACACTCACGAGGTTAGTCTGTTCCGCGTCCTAGAGCATGATGGAAGCTTCCAAGACTAA 522 0.4713 MQLTLEFGGGLELLCDSKKIHNVNIEQQNGEGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTSLEEKDVVAATLSFPSKAVSRVTSSPSAPIQVDDHHKRKRTQTWHKHKQLQGRAMAGHAPMVACDTWAPPPCHTHEVSLFRVLEHDGSFQD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00446 173 PANTHER RURM1 PROTEIN 1 91 IPR015221 GO:0005737|GO:0034227
Vimu9g00446 173 SUPERFAMILY MoaD/ThiS 1 91 IPR016155 -
Vimu9g00446 173 Gene3D - 1 94 IPR012675 -
Vimu9g00446 173 Hamap Ubiquitin-related modifier 1 [URM1]. 1 91 IPR015221 GO:0005737|GO:0034227
Vimu9g00446 173 CDD Ubl_Urm1 3 90 IPR015221 GO:0005737|GO:0034227
Vimu9g00446 173 Pfam Urm1 (Ubiquitin related modifier) 3 91 IPR015221 GO:0005737|GO:0034227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00446 Vimu-Chr9 5277690 5282978 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00446 K12161 - gmx:100306072 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00446 9 5277690 5282978 Vimu9g00446 9 5277690 5282978 ECH