Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00435 ATGGCTTCAGACCCCAGCAGAAAGGGACTGTTAAGCTCAAAGGCCATAGCTGATGCAGCTTCATGGTACTGTGCCTTTCTTCTTGTCGCCCTTTTGCTCCAAACCATGTTCAGATACACCTCCATGCTTCCAAGCCATGTAGACAACAACCAACTCTTTTCACAGCCATGCGAGGAAATCTATGTTGTCGGAGAAGGTGAGACACTTCACACAATAAGTGACAAGTGTGGTGACCCTTTCATTGTTGAGAACAACCCTCACATCCATGACCCCGATGATGTCTTCCCTGGCCTCGTTATCCATATCATGCCTAGAAGTTAA 321 0.4704 MASDPSRKGLLSSKAIADAASWYCAFLLVALLLQTMFRYTSMLPSHVDNNQLFSQPCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIHIMPRS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00435 106 Gene3D LysM domain 50 106 IPR036779 -
Vimu9g00435 106 CDD LysM 60 102 IPR018392 -
Vimu9g00435 106 PANTHER EMBRYO SAC 1 13 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00435 Vimu-Chr9 5151759 5152079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00435 - - gmx:100815990 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00435 9 5151759 5152079 Vimu9g00435 9 5151759 5152079 ECH