Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00411 ATGGAGAATGTGAAATTGGTCAGTCCCTTGCTTAGTCCCTTGCTCAGTCTCGCATGGCCATATCTAAAGCCGTTTCTGTATAAACTTCTGCCTTACGAAATCAGAGATGGACACTTGGCGAAAGATATTAATAAGTTACAGAAGTTGAGAAAGAGGGTGCAACATAAAGTTAGAGATGAAGAAAATCGAATTGAGAGACCTATTGTTGGTGATGTCATAAAATGGTTGGATGAGGTAGACGATGTTATTTCTGACTATGAGGATTTCTTGGAAGATGAAGATCGTCCTTATGCCTTGTACTCCGATGGTTACCTTCCTAAACCTTCCATAAGGTATCGTTTAAGCAAAATGGTGAATGATATTGCAAGTAGGGTTAGCGTACTACTACAGACCTCAAATGATAATGAATTTTTTTATTGGTTGGGGCCATTTCCCTTTGATGTTGATTTTGATAACATTAGGTATGAAATGTTTGAATCAAGAAATCAAATTATGGGTGATATTATGAAAGCATTGGCAGACTCGAGTATTGGAATGATTGGAGTTTATGGGTGGAGTGGTGTGGGGAAGACTAGTTTGATCAAAGAGGTTGTTAAGAAAGTAAAAGGCAACATGTTCGATGTGGTGATCATGGTGAACATAACAAGTCGTTCTGACATACGAATAATTCAAGGACAAATTGCTAAGAAGTTGGGGATGAAATTGGAAGGGGAATCTGAAAGTGAAAGAGCAGCTCACTTACGAGAGAGATTGAAGGATCCGAAGGAGAAAACCCTTATAGTTCTAGATAATATGGAGGTGAAACTGGATTTCAACATGTTGGGAATTCCAACCGAGAACAATGATGCTAGCCAGACTAATCACAAAATGAAAGAAATTTCAGCTCGCCGCAATTATGCATTGAAAAATGAAGAATTTCATGGTTCCATTTTGAGGAAGGTAGAAGATCCTTTTACTAGATACAAAGGATGCAAAATTTTGATGATTTCCAAGAGTGAACAACTTTTGCTAAGACAGATGGGTGGAAAGGCAGTTCAAACATTTTGTGTACAAGCATTAACGGAAAAGGAAGCAGAGACGATGTTTAAGGCCATGTCTGAGATAGATAATGAAAATTCTCTGTTTAAAACATTAGCGGCTCAAATTTCAAAGAAATGTAAAGGGTTGCCCATGACTATCGTAGCAACTGCAAATGCATTAAAAAACAAAAGCCTTCTGGTATGGGAGGATGCATATCGAAACCTTGAAAGGCAAAACTTAACAGCAGTGCAAGAATTTTCAACAAAGTTGAGTTATAATCTTCTAGAAAATGACGAGCTCAAACACACTTTGTTAGTTTGTGCTTGGATGAGCCATGATGCATCACTTACCGATTTGGTGAGAAACTGCATTGGTTTAGGTTTGTTTCAAGGAATTTACACTGTTAGGGAAGGCAAAGATAGAATACATGCGTTGGTTGCAGAGTTGAAGGAGTTAAGTTTGTTGTCTGATAGTTTTTCAAGTGATCATTTCACCATGCAAGATATTATCCGGGATGCAGCTTTGTCAATAGAATCACAACAGATGCATGCATTTGTACTAACAAAGGGAAAACTAGAAGAATGGCCTGACCAGGACAAGCTTGAAAGGTACACTGTGATTTCCTTACAGCATTGCGATGTCACTGACATCATGAAGAAGTTTCCTGAAAAAATAGACTGTTTTAGACTTAGAGTCTTCCGTCTTGACAACAAGGATCCACATCTAGAAATACCCGACAACTTTTTTATAGGAATGAAAGAACTCCGGGTGTTGATATTGATTGGCGTTCATCTATCATGTTTACCTTCATCAATTGAATGCTTGAAAAAACTCAGAATGCTTTGTTTGGAGCAGTGCAAGTTAGGTGAGAATTTATCTATCATTGGACACTTGGAGACACTAAGAGTTCTTAGTTTCTCAGGATCTGTTATTGATAAATTGCCAGCTAAATTGAGCCAGTTAGCTAAGCTACAAATTTTTGACATAAGTAATTGTTTTAAACTTCGAGAGATTCCTCTTGATGTGTTGTCAAAGTTGGATGATTTGGAAGAGTTGTATGTGGGAAATAGCCCAATTCAATGGATAGATGGGGGACAGGGGAATTCTATTCTTTCTGAGCTGAGGAAATTGGACCATTTAACAACACTAGACATACAGATCCCAGAAATTACCCATATGCCTAAGAACATGTTCTTTGACAAGTTGCATAGTTACAATATTGTCATCAGAGATTCTGATGCTTATTCCTTATTGGATATCAACATGCTAGAGATGTGTGAAACATCAAGATTTTTGGCACTTCAATTGGAAAACGGGTTTGACATTCACCACCGAAAGGACATCAAAATACTTTTCGAAAGAGTTGAAAATTTGTTGTTGGGACAGCTAAATGATGTGGAAGATATTTTTTATGAATTGAATTATGAAGGATTTCCATATCTAAAGTGTCTGTCCATTGTGAGTAACTCCAAAATTAAGTCCATCATCAATTCAAGGAACCAAAAACATCTTGAGAAAGTATTTCCCAGATTAGAGTCTATGTTTCTTTATGAAGTCCACAACATGGAGCATATATGCTACAGTCAACTTACCAGTGATTCGTTCTGCAAATTGAAAATCATCAAGCTTAATATGTGTGGTCAATTAAAGTATGTCTTTTTCTCTTCTACAATCAAACATCTTTCTGCACTTGAAGCAATTGAAGTTTCTGAGTGTAACACTCTGAAGGAGATTGTTACCTCAGAAGCGGAAAACAGGGAACAAATTATCTTTCCGGAATTGCGTTCTTTGACACTACAATCTTTGTCTGAATTGATTGGATTCTACACCTATGGTGTGTCATTGGGGGAGCAAGTGTCAAATGAACTCTTTGATAAAAAGCGGGAAAGCATCTTTCCGAAGTTAAAGAATATCAGCCTTGGAAGCATGAAGAGATTGAAAGAGATATGGCATCCCAATTTTCCTTTACATTCCTTTGGCAAATTGGATGCATTGATCATTGAGGGATGTAACAAACTTAAAAATGTTTTTCCTTCTTATATGATCGGAAGATTCCATAGTCTATGCAACTTGAAGGTTACTAATTGCATGTCAATGGAAGAGATATTTGACCTAAAAGATTGCCAAAAACAAGATGTTGAAGATATGGCCAAATTGCAAAATGTTCATGCAGAAGTATTGCCAAAATTGCAGCATGTATGGAATAAGGACCCGAAAGGCATTCTTAATTTCAAAAATCTGAAAAAAATATGGATTCGAGAATGTCTGAACTTGAAACATATATTTCCAGTTTCAACGGCTATGAGCCTCGAAGAACTAGAATACCTTGAGGTCTGGAATTGTGGTGAGTTGAAAGAAATTGTTTCCAGGGGAGAAACAAACGATGCAAGTAGCATTGCATTTGAATTTCCAAAATTAACCACTGTCAGATTTTCTAAACTACAAAGTCTTGAGGGTTTTTATGGGGGAGAACATGAATTGCACTGTTCAGCACTGATTAACTTGTGCGTGGAATGTTGTCATAAGCTCAAACTTTTCAGTAAAGAAAACACAAATTCAGAAATAAAGCCAGTCTTCTTACCTGAAAAGGTTATCTACAACTTGAAGTCCATACAAATAGGCTCACAAGATGCAAATTGGTTGAGGAGTTATGTAGGAAACTACCGGATGCACAAATTAGAAGAGTTTCAATTGTCTTCGCAATCGGATACTGAAATTCTATATTTTTTCCTCCATAGAAATCCGAATCTAAAAAGTTTATTGTTGAGTAATTGTGATCTTGAGCAGTTAGTGCCTCCTATAAGCCATGGTGAAGATAAGTCAGGGGTTGTTCCAAAGCTAAAAAGCTTAAAGGAATGTCCAAGTCTGAACACCATAGCACCTTCCTCGGTAACTTTCATTTACTTAACGATTTTGGAAGTGGGTAATTGTAAAAAATTAGTTTTTCTAATGACACCATCAACTGCAAAAAGTTTGGTTCAACTGACCACAATGAAGACCATTATATCACAAGATGAACATAAAGAACATATCATCTTCAAAAAATTGAAGGAAATAGAACTAGTGGCTCTACAAAATCTTCTAAGCTTTTGTAGCTCCCATATGTGTACCTTTCACTTTCCATTGTTGGAAAAATTTGTGGTAAAGGAATGCCTTAATATTAAAAGTTTATGGTTTTCTCAAGATGCCATTTCGTCACCAATTTTACAACAAATATTACTTCAAAATGGAAAGGAGGAAAGATGTCATGGGAAAGGTGATCTGAATGTTGCGACATCAAACATGTGCCAGGTTTTGGCTCTTGATCCGACCAATGTAGTAGCCTCCAATCCTTACAAGCCACTCGAGAACTCTCGATTGAAGATTTTGAAGCTGGCAAATTGTGAACTTGGATCGCATGCCATTCCAACTGATGTTTTTCCCAGTTTGAAGAACTTGGAAGAATTGGAAGTTAGCAACACAAATGTAGAGGCAATATTTGATATAATGAATGATGAGATAAAGGGATATATTTTGTCATTGAAGAAAATGACTTTAGATAAACTGTCAAAATTGACACAAGTATGGTCGGATAAGAATCCTCAATCAATTTTTAATTTTCAAAATTTGCAAGAAGTGGTGGTTAATAATTGTGAAATTCTTGAAACTCTCTTTCCTATAGAGCTGGCTAAAAGAGTTAAGAAACTTGAAAAACTTAAAATAAGTTACTGTGAAAAGTTTCTAAGAATTGTTGAAGAGGAGAATGCAATCACAGAAGCAACAACGGAATTTTCATTCCCTCGTTTAACCTCACTGAATTTGTGTATGTTACCACAACTCAGTTGCTTTTATCCTGAAAGATTTACTATGGAGTGCCCCCATTTGAAGCATTTAGAGGTGTTATTTTGTGGTGACTTTGAGACATTTCAAATTCATCAAGAGGCACAAAGTTCTACTTCAGTTAATGGACAACCTCTTTTCTATGAAGAAAAGGCTAATTTCATTTTGGAGTCCGTGAAGCTGGATTGGAAAAACACTATGATACTACTTAATGGAAAATTTCCATTTGAGATGCTTCATCAATTAGTCCAATTTGAAATACATTTTTCTGATGTTAATGAGGTACAGGGTTTCCCTGAGCAGTTACTTGAGAAGATTCCTAATGGAGAATATTTACAGATAAGCCAGTATTCTGGTTTTAAGAAGTTATCCCCATCTCTTCCTGAACAAGGTGACTCATCTCATCCTGAACAAGAGTCAAGTTTACGAGATCTTAAGTACAGCTTTGAGAATTTAAATTCTATTTATCTGGGATTTGATGTTGATGAGAATGAGAAGCCTAATTTGCCTATTCAAATACTTCAAAGGAGGCATGAAATTCCTGAAATTAATAACAAGGTGATGCTAGCAGACTTGAAACTTTTGGAGCTGATAGATGTATGGGAGCTCAAGTCTATTGGATCAGGGGATGTTCCATGGTTAGACACTATTTGTAAGAAGCTCCCTAGATTATATGTTGCCAATTGTCCTCATTTCATGCCATTAATGCATTCCTCCTCTGAAACAATTGAGAGTGCAAATTGCAGCAGCTATGCCGCGTATCTTTGTCTGATTTGTCAAGCTTGGAATGTTTTTATTCTGGAAATTGCCTCTTTGATAGAAGTGCGCATAATTGAGTGCCCCAAAATGGAAAATGTCTCTCAAGGATCAGTGGGTCCGAATTTGTGTAGGGAAATTAGAACTTCCTATACCTTAAATAATGGATTGATCATCGTGCATGATGATCTTAACTCCACTATCAAAAAGAATCATATAGTTTTCGGGTATTCTCTTATGTTGCAAGAGATATGGAAATCAGAGACACTCCCAGAAGGGTATTTCCACAATTTAACTTCTATGGTAGTTGAAGGTTGTGAATTTTTATCAGATGCAATACTACCTTCCCATTTACTTCATTTGCTCAGTAACTTGAAAAGATTGCAAGTGCGGAGATGTAATTCTCTAAAGGCAGTATTTATTCATACTAAGATCACTAATATGCAACCTCAAGGAAGTCTTGCTCATCTGGAAGAACTTCATGTGGAAAACTGTGTAGAGTTAGGGACAATTGTTGCAAAGGTTGAAGCAGAAATTGATGAAGCTAATAAACAGATAGCTATATTCTCCACCATAACCTTGTTGAGGCTATCGAATTTGCCAAACCTAAGGTGCATATATCCCGAAATGCACATGTTAAAATGGGATATGTTAAAAGAGTTGCATGTTGAAAATTGCCAAAAGCTGAAGTTTTTCGCAACAGAATATCAAAACCCTACAGATTTAAATCAAGATGATCAAGATAGATTTTCAACAGATCAACAAGCAATTGGGACTTGA 6375 0.3647 MENVKLVSPLLSPLLSLAWPYLKPFLYKLLPYEIRDGHLAKDINKLQKLRKRVQHKVRDEENRIERPIVGDVIKWLDEVDDVISDYEDFLEDEDRPYALYSDGYLPKPSIRYRLSKMVNDIASRVSVLLQTSNDNEFFYWLGPFPFDVDFDNIRYEMFESRNQIMGDIMKALADSSIGMIGVYGWSGVGKTSLIKEVVKKVKGNMFDVVIMVNITSRSDIRIIQGQIAKKLGMKLEGESESERAAHLRERLKDPKEKTLIVLDNMEVKLDFNMLGIPTENNDASQTNHKMKEISARRNYALKNEEFHGSILRKVEDPFTRYKGCKILMISKSEQLLLRQMGGKAVQTFCVQALTEKEAETMFKAMSEIDNENSLFKTLAAQISKKCKGLPMTIVATANALKNKSLLVWEDAYRNLERQNLTAVQEFSTKLSYNLLENDELKHTLLVCAWMSHDASLTDLVRNCIGLGLFQGIYTVREGKDRIHALVAELKELSLLSDSFSSDHFTMQDIIRDAALSIESQQMHAFVLTKGKLEEWPDQDKLERYTVISLQHCDVTDIMKKFPEKIDCFRLRVFRLDNKDPHLEIPDNFFIGMKELRVLILIGVHLSCLPSSIECLKKLRMLCLEQCKLGENLSIIGHLETLRVLSFSGSVIDKLPAKLSQLAKLQIFDISNCFKLREIPLDVLSKLDDLEELYVGNSPIQWIDGGQGNSILSELRKLDHLTTLDIQIPEITHMPKNMFFDKLHSYNIVIRDSDAYSLLDINMLEMCETSRFLALQLENGFDIHHRKDIKILFERVENLLLGQLNDVEDIFYELNYEGFPYLKCLSIVSNSKIKSIINSRNQKHLEKVFPRLESMFLYEVHNMEHICYSQLTSDSFCKLKIIKLNMCGQLKYVFFSSTIKHLSALEAIEVSECNTLKEIVTSEAENREQIIFPELRSLTLQSLSELIGFYTYGVSLGEQVSNELFDKKRESIFPKLKNISLGSMKRLKEIWHPNFPLHSFGKLDALIIEGCNKLKNVFPSYMIGRFHSLCNLKVTNCMSMEEIFDLKDCQKQDVEDMAKLQNVHAEVLPKLQHVWNKDPKGILNFKNLKKIWIRECLNLKHIFPVSTAMSLEELEYLEVWNCGELKEIVSRGETNDASSIAFEFPKLTTVRFSKLQSLEGFYGGEHELHCSALINLCVECCHKLKLFSKENTNSEIKPVFLPEKVIYNLKSIQIGSQDANWLRSYVGNYRMHKLEEFQLSSQSDTEILYFFLHRNPNLKSLLLSNCDLEQLVPPISHGEDKSGVVPKLKSLKECPSLNTIAPSSVTFIYLTILEVGNCKKLVFLMTPSTAKSLVQLTTMKTIISQDEHKEHIIFKKLKEIELVALQNLLSFCSSHMCTFHFPLLEKFVVKECLNIKSLWFSQDAISSPILQQILLQNGKEERCHGKGDLNVATSNMCQVLALDPTNVVASNPYKPLENSRLKILKLANCELGSHAIPTDVFPSLKNLEELEVSNTNVEAIFDIMNDEIKGYILSLKKMTLDKLSKLTQVWSDKNPQSIFNFQNLQEVVVNNCEILETLFPIELAKRVKKLEKLKISYCEKFLRIVEEENAITEATTEFSFPRLTSLNLCMLPQLSCFYPERFTMECPHLKHLEVLFCGDFETFQIHQEAQSSTSVNGQPLFYEEKANFILESVKLDWKNTMILLNGKFPFEMLHQLVQFEIHFSDVNEVQGFPEQLLEKIPNGEYLQISQYSGFKKLSPSLPEQGDSSHPEQESSLRDLKYSFENLNSIYLGFDVDENEKPNLPIQILQRRHEIPEINNKVMLADLKLLELIDVWELKSIGSGDVPWLDTICKKLPRLYVANCPHFMPLMHSSSETIESANCSSYAAYLCLICQAWNVFILEIASLIEVRIIECPKMENVSQGSVGPNLCREIRTSYTLNNGLIIVHDDLNSTIKKNHIVFGYSLMLQEIWKSETLPEGYFHNLTSMVVEGCEFLSDAILPSHLLHLLSNLKRLQVRRCNSLKAVFIHTKITNMQPQGSLAHLEELHVENCVELGTIVAKVEAEIDEANKQIAIFSTITLLRLSNLPNLRCIYPEMHMLKWDMLKELHVENCQKLKFFATEYQNPTDLNQDDQDRFSTDQQAIGT 2124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00411 2124 Gene3D Ribonuclease Inhibitor 959 1367 IPR032675 -
Vimu9g00411 2124 Gene3D Ribonuclease Inhibitor 1590 1923 IPR032675 -
Vimu9g00411 2124 Gene3D Ribonuclease Inhibitor 1427 1589 IPR032675 -
Vimu9g00411 2124 Gene3D Ribonuclease Inhibitor 1942 2114 IPR032675 -
Vimu9g00411 2124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 447 IPR027417 -
Vimu9g00411 2124 Gene3D - 152 345 IPR027417 -
Vimu9g00411 2124 Gene3D - 352 436 IPR042197 -
Vimu9g00411 2124 SUPERFAMILY L domain-like 506 920 - -
Vimu9g00411 2124 Gene3D Ribonuclease Inhibitor 542 958 IPR032675 -
Vimu9g00411 2124 PRINTS Disease resistance protein signature 252 266 - -
Vimu9g00411 2124 PRINTS Disease resistance protein signature 659 675 - -
Vimu9g00411 2124 PRINTS Disease resistance protein signature 179 194 - -
Vimu9g00411 2124 PRINTS Disease resistance protein signature 386 400 - -
Vimu9g00411 2124 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1057 1187 - -
Vimu9g00411 2124 SUPERFAMILY RNI-like 1081 1638 - -
Vimu9g00411 2124 SUPERFAMILY L domain-like 1687 2100 - -
Vimu9g00411 2124 Coils Coil 43 63 - -
Vimu9g00411 2124 SUPERFAMILY L domain-like 877 1184 - -
Vimu9g00411 2124 MobiDBLite consensus disorder prediction 2105 2124 - -
Vimu9g00411 2124 Pfam NB-ARC domain 163 279 IPR002182 GO:0043531
Vimu9g00411 2124 Pfam NB-ARC domain 311 426 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00411 Vimu-Chr9 4925603 4936466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00411 - - vra:106778987 1845.86