Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00408 ATGGATGGAGCTGTAGCTTGTGGACGAGAAACACAGAATGAAACCTTGTTTATAGATCAAAAAGAAGATTTTCTCTTGCACCGCTGTGAAGATGTATCGGCAACAGCAATTAAGCGTTTCCTCGCGAACTCATTTGACAACATTAGTACATTCAACAGCGACATTCTCGAATCTGAAACAACTTACTTATTTACATCCTCAACTGCAAGAAAGTTAGTGCACCTTGAAGAGCTGTGCATAGTGCAATGTGTATCCATGGAAGAAATATTGGCAAAAGAACTAAACGAAACTGCATCAGAAGCCATACGATTTGAGCGACTTTCAACATTAATTCTAGATTCTTTATCAAGCCTGTCATGCTTTTATTCAGGCAATGGAACTCTACATTTATCATCTCTGATAAGATTACTCATATGGAAATGCCCCAGTATGAAGATTTTCTCCAATGGAAACATAAATGCACAATCCTTTGTGGGAATTCAGGTCTCGTTGGATCCAGAAGAAGGTTTGCTCTTTCACCAAGATCTCAATACCACTGTCAAGCACATGTTCGAACGTGGGGAGTTTCTTGGAGCTGTGTATGAAGAGTGTTTCTCTGATAATCTTCAGCTACAATCATACTTTCAAAATGAAAGGTTGTGCACTTTGGTAACAGTGAAGCTTCACAACTGTACACTACCCTATGGAATTCCCTCTAGCATTCTTCCACATTTAAACAAGTTAAAAGAGTTGGAAGTACTTGATTCCAACAAAGTAGAAGTAATCTTTTACATGAATGACACTGACATATTGGAAGCACCATCCCAACTACAGATACTGGTTTTGAAAGAGCTATCGGAGCTGACACATATTTGGAAAAATAACTGTCAAGAACTTCTGAGGTTTCCAAATTTGAAAGAGATCGTTGTCAGTGGTTGTGAAAAACTGAGAACTCTACTTCCTGCGTCCCTAGCAAAAACCCTTGAGAAGCTTGAGAAACTTGAAATAGAATCTTGTTATGAACTTCAAGAAATCGTTGCAAAGGAAGTAGGAACAGAAAACGTAGTAGAAAACTTTGTGTTCCCGAGCTTAAAGAAGTTGGATCTTTGTGACTTGCCACGACTCACTTCCTTGTACCCTGACACGTTCACTCTTAAGTGCCTTACATTAAACAAATTATCTGTGTTATTTTGCCATGAGCTGAAGTTATTTCAAAGTACACATCACATGGGTGATAGTGAAGGTACGAGTACTCCAAATAACACACAACCTCTCATCTCAAATCTAAAGGCCATTTCCAACTTGAAGAAACTGAGACTTGATTGGAAACACATCTCAGCACTAAGCTTAAGGTTTAGGTCAGAGATATTTGCAGAAGGCCTCAAATGTTTAGAGGAAATTGCCTTATTTTTCAATACTGATGAGAATGAGAAGGCTATGTTGCCCATTGAAATACTACAAATGGCACCCAATTTAATAGAAATGAGTATAAACTGTTGCAATGATCCCGATATATTCCTTGGTGAACACCCTGAAATTAGTGAAAAGAGGATGCTTGGACAGTTAAAAATATTGAATCTGTGTGAAGTATGGGACCTCAACTCAATTAAATCAGAATACTCTTTATGGTTAAACATCATCTATGAGAAGCTCCAAGAGTTAAATGTTTCCGAATGTCTTCATTTGAAAACATTATTACCTTTTACTTCTACAGTATCTTTCTCTGATCTAAAAGAAGTGTTTATATCTAAATGTTTGGATTTGCAGTATTTATTTACATTCTCAGCAGCAAAGAGGTTAATAAATCTCGAAAAGATCACAGTGAAGGAATGCAAATCACTGTTAGAAATAGTGAGTACAGAAGCTGGAATTTCAGAAGACATTCTTAAATTTGATCTACTGCACACCATTGCTCTACAATCTTTACCAAGTCTGACATGTTTTTATCGAGGAAGTGAAACTCTCCACTTACCGTCTTTGATCAATGTGCATATAAAGGAATGCCCTAATATGGAGGCTTGGGCCCGAAGAGCCTTAGATGCTAAATCCTTTCCGGAAATTCAGATATCGACGTTCCAATCAGGGACGCAAAGGGTATCACTGACTGATCTCAAAACTCAACATGTGATATGGCGTGGCTCAGAGCCTATACCCAACTTCTATTTCACTGAGTTGGACACATTGATTGTAGACGGCTGCTCGTTTTTGTCAGATGCAGTGCTACCCTTCCATTTACTTTCTCTATTACCTAAATTGGAAACATTGGAAGTTCGAAACTGTGATTATGTCAAAAGCATATTTGATGTCAATCCTTCAACACAAGACACTTTAATTACTTTTCGTATGAAGATTTTGGTTTTATCGAAGTTGCCAGAGCTAGAAGCTGTTTGGAACGAAGAACCTCATGGGATTTTATGCATGCAACATCTAAAAAGAGTAGAAGTTGGGGCATGTAAAAGCCTTATAAGCGTGTTTCCAGCATCTGTAGCCAAAGATCTTGAACTTGAAGGTCTAGTAATTGAATGGTGTGAGAGATTGGCGGCAATTGTTGCAGAGGATAATACAGATTCAAATCTACAGTTTACGCTTCCCTGTCCCTACCTGAGATCATTGAAATTAGGGAAATTGCAAAAGTTCACGTACTTTTATTACTGCTCACACAAGTCTGACATTTATACGCATCTCGAATCAGCAACCGAACCTCAACTTCCTAAAGAAAAGTTTTGGAAGGATATTCTGATGCAAGTTGAATTACAAATACAGAAGATCACTCTTCAACTAGTGGTTGGATTTTCCTCCTTGGGGGAGGTGCAATTTCTTGATCATTCCACTATGGCTTCAGAGTTTATAGCTCTAGCTTCAACAGGAAAGGAAGCCGAATGGTTGAGGAATCTCAGGTTCGAAATACCATTGTTACCAAAACCAATATCACCAATAGCAATACATTGTGACAATGTTGTAACATTGGCAAAGGCTTATAGTCAAGTATACAATGTAAAATCAAGACATATTGGTGTGAGACATAGTTATGTCCAAGGACTCATCAAAGATGGAATTATTACAGTAGATTTCGTACGAACAAAGTTGAATTTGGCTAATGGATTCACTAAGGCATTGGCTAAAGATTCCATTTCCAGAATGACAAATGGAATAGGAATGGAGCCCACGATTAATCACAAGTAA 3162 0.3795 MDGAVACGRETQNETLFIDQKEDFLLHRCEDVSATAIKRFLANSFDNISTFNSDILESETTYLFTSSTARKLVHLEELCIVQCVSMEEILAKELNETASEAIRFERLSTLILDSLSSLSCFYSGNGTLHLSSLIRLLIWKCPSMKIFSNGNINAQSFVGIQVSLDPEEGLLFHQDLNTTVKHMFERGEFLGAVYEECFSDNLQLQSYFQNERLCTLVTVKLHNCTLPYGIPSSILPHLNKLKELEVLDSNKVEVIFYMNDTDILEAPSQLQILVLKELSELTHIWKNNCQELLRFPNLKEIVVSGCEKLRTLLPASLAKTLEKLEKLEIESCYELQEIVAKEVGTENVVENFVFPSLKKLDLCDLPRLTSLYPDTFTLKCLTLNKLSVLFCHELKLFQSTHHMGDSEGTSTPNNTQPLISNLKAISNLKKLRLDWKHISALSLRFRSEIFAEGLKCLEEIALFFNTDENEKAMLPIEILQMAPNLIEMSINCCNDPDIFLGEHPEISEKRMLGQLKILNLCEVWDLNSIKSEYSLWLNIIYEKLQELNVSECLHLKTLLPFTSTVSFSDLKEVFISKCLDLQYLFTFSAAKRLINLEKITVKECKSLLEIVSTEAGISEDILKFDLLHTIALQSLPSLTCFYRGSETLHLPSLINVHIKECPNMEAWARRALDAKSFPEIQISTFQSGTQRVSLTDLKTQHVIWRGSEPIPNFYFTELDTLIVDGCSFLSDAVLPFHLLSLLPKLETLEVRNCDYVKSIFDVNPSTQDTLITFRMKILVLSKLPELEAVWNEEPHGILCMQHLKRVEVGACKSLISVFPASVAKDLELEGLVIEWCERLAAIVAEDNTDSNLQFTLPCPYLRSLKLGKLQKFTYFYYCSHKSDIYTHLESATEPQLPKEKFWKDILMQVELQIQKITLQLVVGFSSLGEVQFLDHSTMASEFIALASTGKEAEWLRNLRFEIPLLPKPISPIAIHCDNVVTLAKAYSQVYNVKSRHIGVRHSYVQGLIKDGIITVDFVRTKLNLANGFTKALAKDSISRMTNGIGMEPTINHK 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00408 1053 Gene3D Ribonuclease Inhibitor 200 406 IPR032675 -
Vimu9g00408 1053 CDD RNase_HI_RT_Ty1 936 1035 - -
Vimu9g00408 1053 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 211 409 - -
Vimu9g00408 1053 SUPERFAMILY L domain-like 200 607 - -
Vimu9g00408 1053 Gene3D Ribonuclease Inhibitor 506 883 IPR032675 -
Vimu9g00408 1053 SUPERFAMILY RNI-like 531 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00408 Vimu-Chr9 4901608 4911593 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00408 - - ccaj:109806876 705.286