Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu9g00389 | ATGGAGGCAAACCAGAAAAAACGCATGTTGGAGATCATCGTTGTGTCGGGAGAAAACATAAGACTGGATCGAAATTCAGTTTCCGAGGTCTGTGTTGTTGTTCGTGCTGAGTCTTTGAACTGTTGCACGACCAAAATGGTGAATGGAAATGATGGAGTGCATGCATGGAATGAGAAATTGGTGTTGGAGGTTCCTTCATATGCAAGGTCTGTTACGTTTGAGGTGCAATGCAAGAAATACAAAGAAGCTCGTCCTGTCGGAGTAGCAAGGATTGCTCTGTCGGATTTAGTTAGTGTAAAAAATCATAGTGTTGTGTCTGAAAATGTTCCTCAAAGTTTTTGCTATGGTTTAAGGGGCTGGGATGGTCGACCGAACGGAGTTATTCATTTCTCAGTGAAGATTGTGGATAATTTGTGTTTAGAAACGGAGCAAGATAAAGACGTAAAGATGGTGAACTCTAAAGGAATTGAAAGGGAAGTTATAGGGTTTCGTATGAACCCTAAAAAATCACATCGTGTTGTCATTGGCATTCCAGTTAACTGGTTTGCTAAACTTTTGAAGGTTGAGGGTTGA | 573 | 0.4101 | MEANQKKRMLEIIVVSGENIRLDRNSVSEVCVVVRAESLNCCTTKMVNGNDGVHAWNEKLVLEVPSYARSVTFEVQCKKYKEARPVGVARIALSDLVSVKNHSVVSENVPQSFCYGLRGWDGRPNGVIHFSVKIVDNLCLETEQDKDVKMVNSKGIEREVIGFRMNPKKSHRVVIGIPVNWFAKLLKVEG | 190 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu9g00389 | 190 | PANTHER | INGRESSION PROTEIN FIC1 | 8 | 145 | - | - | |
| Vimu9g00389 | 190 | Pfam | C2 domain | 10 | 99 | IPR000008 | - | |
| Vimu9g00389 | 190 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 136 | IPR035892 | - | |
| Vimu9g00389 | 190 | Gene3D | C2 domain | 2 | 159 | IPR035892 | - | |
| Vimu9g00389 | 190 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Vimu9g00389 | 190 | SMART | C2_3c | 9 | 105 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu9g00389 | Vimu-Chr9 | 4593607 | 4594179 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu9g00389 | - | - | vum:124823166 | 286.574 |