Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00388 ATGGCCACCCAATCAACTACTCTCCAGCTCACCCTTCTCTCAGCGAAAGGTCTTCACGTCAGAGGAAAACCGGCCAACACCAACGTCTTCGCGGTGGTTCGCGCCGACTCCATTGCCAGCCACACGACGGCGACGGCCACGGAGAGCAACGGGTCGCTGTCCTGGGAGGAGACGTTTTCGTTGGAGGTGGGGCCTTACGCAAGGTGCCTGACTATTGAAGTGAAGTACAGGACGGGAGCGGGAGAGAGAGACGTCGGCGTGGCAAGAATCGCGCTTTCGGATTTTCTTGGAAGGTCGGTGCCCGGTAATAGATTGCAGTTGTGCTACAGGTTGAGGGACTGGGATGGGAGAGAAAACGGGACCGTTAATTTCTCCGTCAGAGAGGTGGCGCCGCCACAGCCTCACGCCGCCGCCGCCGCCGCCGACTAG 429 0.5991 MATQSTTLQLTLLSAKGLHVRGKPANTNVFAVVRADSIASHTTATATESNGSLSWEETFSLEVGPYARCLTIEVKYRTGAGERDVGVARIALSDFLGRSVPGNRLQLCYRLRDWDGRENGTVNFSVREVAPPQPHAAAAAAD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00388 142 Pfam C2 domain 7 99 IPR000008 -
Vimu9g00388 142 PANTHER INGRESSION PROTEIN FIC1 7 128 - -
Vimu9g00388 142 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 130 IPR035892 -
Vimu9g00388 142 SMART C2_3c 7 104 IPR000008 -
Vimu9g00388 142 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Vimu9g00388 142 Gene3D C2 domain 5 127 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00388 Vimu-Chr9 4581439 4581867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00388 - - vra:106773894 235.343