Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00384 ATGGGAAGTGAGAAAGGAGAAAGCTCGTGCGCCTCGCCATGGCTGAAAATCTCGAAGGAAGTTGACCCTGCAGCTGCCTCCCAGACCTTGCACTTCGTTGATCGCATGGGAGCTTCCACCGCCGTCCCCCCTAAATGGGACGCGCGTGGCACCTACGACCACCTCTATCGGAACTTCATCAAAGTCCTTCACATCCAACCAGGACGAATTTCGATCTCCGTTCACGTCAAACCCCCCATCTGTAATGGCTATGGAACTCTGCATGGGGGTTCTGTTGGGACTTTGACTGAGATTCTGTCGACTGCTTGTGCTAGAACGGTAGTTCCTGAAGACAGGGAACTTTTTCTTGGGGAAATTAGCATTTCTTACTTGTCTGCCACTCCAGCAAATGAAGAAGTGTTAGCAAATGCCTCCGTAGTGAAGTCCGGCAGAAATTTGACTGTAGTCGCAGTTGAGTTCAAATTGAAGAAATCTGGGAATATGGCATATAGCAGTCGTGCTACCTTCTATAACATGCCTCTTTCCAGTTTATGA 534 0.4906 MGSEKGESSCASPWLKISKEVDPAAASQTLHFVDRMGASTAVPPKWDARGTYDHLYRNFIKVLHIQPGRISISVHVKPPICNGYGTLHGGSVGTLTEILSTACARTVVPEDRELFLGEISISYLSATPANEEVLANASVVKSGRNLTVVAVEFKLKKSGNMAYSSRATFYNMPLSSL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00384 177 NCBIfam hotdog fold thioesterase 60 157 IPR003736 -
Vimu9g00384 177 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 60 170 IPR029069 -
Vimu9g00384 177 CDD PaaI_thioesterase 60 170 - -
Vimu9g00384 177 Gene3D Hotdog Thioesterase 45 173 - -
Vimu9g00384 177 Pfam Thioesterase superfamily 84 158 IPR006683 -
Vimu9g00384 177 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 27 174 IPR039298 GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00384 Vimu-Chr9 4503285 4506569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00384 K17362 - gmx:100499764 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00384 9 4503285 4506569 Vimu9g00384 9 4503285 4506569 ECH