Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00332 ATGATTCCACAGTTGACAGGAATTATGAAGAATGAAGGAAAATCAGGAGAGGATAGAATTAGCCAGTTATCAGATGATGTACTGTGTCACATCCTTTTGTTCCTTACCACCGAGGAAGCCATAGCTACATCCTTGTTGTCTACCAGGTGGAGATTTCTATGGAGAATGCTTCCATTTCTTGACATTCAGTGCTCCAAACCAATCATAAAATCCCACAAGAGTGTTAATACATTCTTGGCACTACGCATAACACAAAACATCACAAGGTTTCATCTCAAATGTAATAGCCATAGTTGTTGCTCACATTATGTGGAACAATGGGTCTCTGCAGTGAAAGCAAGAAAACTTGAACATCTAGATATCTCCTTATGCATGTGTCACAGAAGCGTGATCAACTTCGCCACCTTGTTCACCTGTGCCACACTTGTCACTTTGAAGCTCGAGGGTCTCTTTAATCTCTCTATTCCTTCTGGTGTTCATCTTCCTAAACTCAAAAGTTTGCACCTGCACATACATGCATTCACCTCCTTCTCCAGCATCAGGAACCTTATCTCTGGATCTCCAGCTCTTGAACTGTTCCACCTGAGGCAGAACTGGTACTTGTCACATTTCAACGAGTTGAAGATTGTGCGAAACTCTCGAGTTATCCAACTGCTCCAACGCAAATGGTTTTACAACCTTGTTATACAAAGTGATCGTTATTATGATTTTGTCCCAGACTACTTGGAAAGTGGTAGTAGGTCAAACATTGTTAAAGCCAAAGTTTATATGACAGTGTTTGGTGGAATCAAGGATTTTTATGCTAACCAGTTTGTTTGTGAGACTCTGAAAGAATTATGTAACGTTGAGTTTCTTTCTTTGGGTGATTTTAGGTTAGAAACATACCCTTCTAGTCTTGATCTTCCACTCTTGAAGAATCTTGTTGAGCTAAGATTGTCTCTTGAAAATAGGGACTCCTTGTATATGGAACTTCCTGGGAAGTGTCCTAAGCTTGAAGTTCTTGAAGTTAATATCATGGATGATCGCTGTGGTGGTAATCAAAGGTGTAAATATCGTATTAGAGGTGGAGTGAGGGAACACGACTTGTCTATTGTTCCTTTTTCACCAGAGACAACATTGCTGGAAAGTTGA 1131 0.4014 MIPQLTGIMKNEGKSGEDRISQLSDDVLCHILLFLTTEEAIATSLLSTRWRFLWRMLPFLDIQCSKPIIKSHKSVNTFLALRITQNITRFHLKCNSHSCCSHYVEQWVSAVKARKLEHLDISLCMCHRSVINFATLFTCATLVTLKLEGLFNLSIPSGVHLPKLKSLHLHIHAFTSFSSIRNLISGSPALELFHLRQNWYLSHFNELKIVRNSRVIQLLQRKWFYNLVIQSDRYYDFVPDYLESGSRSNIVKAKVYMTVFGGIKDFYANQFVCETLKELCNVEFLSLGDFRLETYPSSLDLPLLKNLVELRLSLENRDSLYMELPGKCPKLEVLEVNIMDDRCGGNQRCKYRIRGGVREHDLSIVPFSPETTLLES 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00332 376 Gene3D Ribonuclease Inhibitor 60 340 IPR032675 -
Vimu9g00332 376 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 18 347 - -
Vimu9g00332 376 Pfam F-box domain 20 58 IPR001810 GO:0005515
Vimu9g00332 376 CDD F-box_AtFBL13-like 20 55 - -
Vimu9g00332 376 SUPERFAMILY RNI-like 97 336 - -
Vimu9g00332 376 SUPERFAMILY F-box domain 16 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00332 Vimu-Chr9 3953965 3955095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00332 13 359 EF-hand Containing Proteins AT5G41840 27.361 8.00e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00332 - - gmx:102659597 440.654