Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00327 TTAACTTTCGTTTGGTCTGAAACAGAGTTTGGTTCGAAACAGAGCCACCCAATAATAATTTCCCACATACTAAAAACAAACCTTAACATAATCAACGTACAAGTGTTCCATGTTTTTCTATTATTTTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTCCAACTCAATGTACCACCAACCCAGAACCCAACAACTTAAACCCACAACCTTCTTCTCTTCTCTCTTCTGCCCAAAATGCCCTCTCAACCACAACCTCCTTCTTCTCCTTCCCAAGCCCAACAAAAAGCCCACCATCTCCGCCTCTCTCCCTACCGGGCCCGCCTCCGGGCCCGACCAGGCCCTAATCTCCCTCCTCCGCTCCATCCCGGACTGGGCCGACACGGTGCAGGAGCGCGGCATGCAGAAGAAGCGCTCCCTCTACACCCACCTGAACTGGCGCGACCACCGCAGCTCTATCCGCCATCTCCGTCACCTCCTCTCCAGCCTCTCCTCCCGCGTCATCCTCTCCCTCGTCCCCCCTGTCCTCTTCTTCACCGGCTTCGCCGCCGCCATCGCCTCCTACAACCAAGCCCTAATCCACCACGTCCTCCCCGACTTCCTCCCCCTCCTCCACTCCTCCTCCCTCCCCTACCAGCTCACCGCCCCCGCCCTCGCCCTCCTCCTTGTGTTCCGCACCGAAGCCTCCTACGCTCGCTTCGTCGAGGGCAAGAAGGCCTGGACCAACGTCATCGCCGGTACCCACGATTTCGCCAGACAAGCCGCCGCCTTCCTGGACGACGCTGATAACGCCGACTTCTCCGTCAAGCACGCGCTTTTGCAGTACATCATCGCCTTCCCCATTGCGCTTAAGGTCTCTCTTTCTGAGCCTCTCAATTCTAATCGCAATTTTTCGTATTGTGGAAAAGTACAGACCAATGCAATTCGTTTGGCAGATTGCAGCCTAGATGACTGTTTTCTAAAACCTCGATCTAAGTTTGTGTTTGATTCAGTTGGAAGAGCTCAAAAGAGGTTTTTAGATGCAACAAGTTCTATCTTCTGCCACGTGCTGTATGGTTCGGATATTAGGAGAGATCTTCAGCATTTGCTGGAAGTGGATGATCTAGCAGTGGTAATGAATTCAAAGCACCAGCCACGCTGCATTATTGAGTTTATATCGCAGAGCATTCGGTTGCTGAAATTGGAGGAGTCCAGAAGAAATGTGCTGGAATCAAAGATCTCTTGTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGCATTCCCATTCCATTATCATATACTCGTTTGACATCAAGGTTTCTTGTCCTGTGGCATCTGACACTACCTATCATACTTTGGGACGATTGTCATTGGATTGTGGTTCCTGCAACTTTTATTAGTGCTGCCTCTTTGTTTTGCATTGAAGAAGTTGGAGTTCTCATTGAGGAGCCATTTCCAATGCTTGCACTTGATGAACTATGCCAAAAGGCACAGAATGACATCCAAGAAGCAATTGCAACCGGGAATTTAATCCATGCACGCTTTGTTGCTAAGAAAAATAGCCACTCTGAAGAGCATTCACCAAATGGCTGGCCCAACTCCTAA 1590 0.4969 LTFVWSETEFGSKQSHPIIISHILKTNLNIINVQVFHVFLLFFFFFFFFFLFFSNSMYHQPRTQQLKPTTFFSSLFCPKCPLNHNLLLLLPKPNKKPTISASLPTGPASGPDQALISLLRSIPDWADTVQERGMQKKRSLYTHLNWRDHRSSIRHLRHLLSSLSSRVILSLVPPVLFFTGFAAAIASYNQALIHHVLPDFLPLLHSSSLPYQLTAPALALLLVFRTEASYARFVEGKKAWTNVIAGTHDFARQAAAFLDDADNADFSVKHALLQYIIAFPIALKVSLSEPLNSNRNFSYCGKVQTNAIRLADCSLDDCFLKPRSKFVFDSVGRAQKRFLDATSSIFCHVLYGSDIRRDLQHLLEVDDLAVVMNSKHQPRCIIEFISQSIRLLKLEESRRNVLESKISCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCQKAQNDIQEAIATGNLIHARFVAKKNSHSEEHSPNGWPNS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00327 529 PANTHER UPF0187 PROTEIN YNEE 134 521 IPR044669 -
Vimu9g00327 529 Coils Coil 482 502 - -
Vimu9g00327 529 Pfam Bestrophin, RFP-TM, chloride channel 149 489 IPR021134 GO:0005254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00327 K08994 - cit:102620517 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00327 9 3896252 3899637 Vimu9g00327 9 3896252 3899637 ECH