Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu9g00313 | ATGTCATTTTTGTGTGGGTTTCCTGTCATTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCATGGAAAAAATGTCTGTACAGTGCAGGCTATGAGAGTGAAAATTGGGGGTTGGCTACTGCACAAGAATTTGAGCCTGTTCCTCGGATCTGTCGGCTAATCTTAGCCGTCTATGAAGATGATATTCGTAACCCTCAATGGGCTCCCGAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTACGGAAAGACTACGACGATAACCAAGGCCGTGTTACACCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTGGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGATTATGTTGTTTTGCTTGATAATAAGCTGGGACAGGCTGAATTTCATGGTGGTTATGTTCATAATGGGCTATTGAAGGCAGCTGGATGGGTTTTTGATGCAGAAAATGAGGTTCTTAGGAAGCTAGTGGCAGAAAATCCAACTTATATGTTAATATTTACAGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTAGCAGTTCATAATCGAGACAAATTGGGTATACCGAGAAACAAGATAAGATGCTTTGCAATAGCTTCTCCTCGCTGTATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTACTCCAGGTTGGACAGTCTCCTTCTGATATGAACTTAGTACAACAACATGACTGA | 750 | 0.4227 | MSFLCGFPVIECVYCLACARWAWKKCLYSAGYESENWGLATAQEFEPVPRICRLILAVYEDDIRNPQWAPEGGYGINPDWVILRKDYDDNQGRVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAENEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGIPRNKIRCFAIASPRCMSLNLAVRYADVINSVVLQVGQSPSDMNLVQQHD | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu9g00313 | 249 | CDD | Lipase_3 | 44 | 234 | - | - | |
| Vimu9g00313 | 249 | PANTHER | ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN | 1 | 234 | - | - | |
| Vimu9g00313 | 249 | Gene3D | alpha/beta hydrolase | 39 | 247 | IPR029058 | - | |
| Vimu9g00313 | 249 | SUPERFAMILY | alpha/beta-Hydrolases | 44 | 229 | IPR029058 | - | |
| Vimu9g00313 | 249 | Pfam | Lipase 3 N-terminal region | 10 | 74 | IPR005592 | GO:0016042 | |
| Vimu9g00313 | 249 | Pfam | Lipase (class 3) | 115 | 235 | IPR002921 | GO:0006629 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu9g00313 | Vimu-Chr9 | 3785270 | 3786019 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu9g00313 | 1 | 234 | Miscellaneous Gene Families | AT4G00500 | 70.638 | 6.10e-124 | 358 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu9g00313 | - | - | vum:124821940 | 480.715 |