Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00302 ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGTGCAATAGGTGGACCTTCTACTAGGGACACCGGAAGATCTGATTCACCTTCTTTGCCTGCAAACTTCTCTGTAAGTTCAAGGCGACAACCACCGTTAAACCCATACAAGTTGAAGTGTGATAAAGAACCCTTGAACTCTAGGATGATAACCAAGCAGTATGCGATCTCATTTTCTGGTTGCTCATGTGCTAGTGACTTGAGGGGGATGGATTGCCCAGGGCTCAGGTATCATCTTGGTGGAGGTGTTGTGTCAATAGCAGGATCAGTTGTGGCAACTACTGGTGTGCAGGAAGGAAGTAAAGCAACAGTGCAGTCCACCACTAAGCCCAATGGAGGTGCACATACACTTGGAGAAACTGTCATACTGTGTTTTAAGGAGAAGGGAAGAGGGTTGATGTTTCCCGGAGGGCCATCTGATATTCCCAGTTCAGTTGCCAGGGAAACGCTTGGGGCACCAGACTTTCATCCCCAAACATCAAACTGTCCCGAGGAGACCTTGACCAGAGAATATTTGCAATCTGGATACAGGGACACAGTTGAGGGACTCGAGGAAGCCAGAGAAATTTCTCTAACGCAGGTTCCACATTTTAACAAGAATGTTATTCTTACTTGCAAAGAGGCTATTAGAAAACGTTTGAGGGCCATCAATGAATCTCGTGCTCAGAAGAGGAAGGCTGGTCAAGTATATGGTGTAGCTCTTTCAGGATCTCAACTTGCCAGGTCTGGAATTTTCCCAGAACTAAGACCTTGTGGTGAGGACTTCCAGAAGAAATGGATTGAGGGTTTATCTCAGCAGCACAAGCGGTTGCGCTCTTTAGCTGATCATGTTCCTCATGGTTATAAAAGGGCATCACTTTTAGATGTTCTTATAAGGAATAACGTTCCATTGCTTAGGGCCACCTGGTTTATCAAGGTTACTTACCTCAATCAGGTTCAACCTGGTTCTGTTGGTATTTCTTCTGGAACTGCTGACAAGATTCAACTCTCACGCTCCGATGTTTGGACCAAAGATGTTATCAATTACTTGCAAGCCCTTCTGGATGAATTTTTGTCAAAGAATGTTTCCCATTCTGCTTCTCATGGTCGAGAGCGATCACCACAAATACCTGGACCACTGCAGAATAAAAGTGATCCATTATTATCTGTTACTGATGGTGAAGGACCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTTCTGCAATGGCATCATGCTGAAGGGCTGCTTCATCCATCTCTTGTCATTGATTGGGTATTTACTCAACTACAGGAAAAAGATCTGCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGTTTTTTAGAAACTATTGTACTATCTCAAACTTATGTGCGTACCCTTGCTGGACTAGCTCTTCGTGTCGTTCGTGATCCTGCTCCAGGTGGTTCAGATCTAGTAGATAATTCCAGGAGGGCATACACAACTTGTGCTGTGATTGAGATGCTTCAGTATTTAATACTTGTGGTGCCAGATACTTTTGTTGCTTTGGATTGCTTTCCTTTACCTTCTTCTGTTATTTCACATACAATGAACGATGGGAATTTTGTACTAAAATCAACTGAAGCTGCAGGGAAGGTAAAAAATAGTTCAGATGATTTTGGTCGCATTATTTCACGCATTCAGAAACATACAGAGGATCTTGCTAAGGCTTCAATCCCAGGCTCTCCAGGTCATTGTCTGGCTAAAGTGGCAAAAGCCTTGGATAAGGCTCTTGTTCTGGGTGATTTGCATGTTGCATATAAATTTCTTTTTGATGATCTTTGTGGTGGAACTGTATCTGAAGGCTGGGTTGCAAAAGTCAGCCCTTGCTTAAGGTTATCTTTGAAATGGTTTGGGACTGTGAATACACCCCTTATATATTCTGTGTTTTTCCTTTGTGAGTGGGCAACATGTGATTTTAGGGATTTTCGTGGTTCCCCTCCTCATGACATTAAGTTTACTGGTAGGAAAGATCTTTCCCAGGTGCATATAGCTGTTAGGCTTTTAAAGATGAAGATTAAGGATGTGAAGATTTCACTGAAACAAACAAATGAATATCACAGAGCCAGTCGTTTTGCAAAGAATTCGGGTCAGCGGCCTAATTCAAATCATGTGGGTAAATCATCCAGACTGAAATCTAGTTCAAAAAGTACAGGTTCTTCAGTTATATTTGAAAGCCCAGGACCACTGCATGATATTATAGTATGCTGGATTGATCAGCATGTGGTACATAAAGGGGAAGGTTCCAAGCGCCTACAACTATTTATGGTGGAACTCATACGTGCTGGCATCTTTTATCCCTTGGCATATGTACGCCAGCTGATAGTCAGTGGGATCATGGATGCGAATGTAAATTTGGTTGACATGGAGCGACGGAGGAGACACTATCGCATCTTAAAGCAGTTACCCGGATGCTTTATCCATGATGTTTTGGAAGAGTCAGGAATTGTTGATGGGGTGCATCTCAAAGAAGCATTACAAATTTACTTGAATGAACGTCGCCTCATACTTCGGGGTCCTCTAAGTGAGTCCCATGATGATGCCAGTGGTACTGATTTACCTCCTCTAAAGAGAAAAAAATATCCTGCTTCAATAAAGGATGAAGTTTCTGGAATTACCATTGATCAGAGAAATGTTATTTCTACCACAAAAAATGTCAAGGATAATGCTAAGATTGAAGAACTAAGAACAGCTATTTCAGTACTGTTACAGCTACCTAATTGTTCATCGAATTTGAGTGCTACAGGCTGTGATGAATCTGAAGGCACTGTTAGAAGATCTATTGGGTCTCAGAACAGCAAAATTGATCCAGTGGAGGGTACACCTGGGTGTGAAGAATGTAGCAGAACAAAGAGACAAAAGTTAAGTGAGGAAAGAAACTCATTCGTACAAGGGCATTCCCCAGTTCAATCTGATGATGACGATGCATGGTGGGTGAAAAAGGGAATGAAATCCCCGGAGCCTCTCAAAGTTGATCAACCACAAAAGTTAACCAAGCAGGTCACGAAGAGTAGGCAGAAGAATGTGCGTAAAACTCAGAGTCTCGCTCAACTGGCAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCAACTAGTCATGTTTGTGGAAGCAAGGTAAACTGCCCTCACCATAAAACTGCTATGGATGTGGATGGGCAGAGGTCTGTGGATATCATCCCCACAAGTCATTTTGGAGATATAGTTTCCATTGGAAAAGCTCTAAAGCAGCTACGTTTTGTTGAGAAAAGGGCAATAGCCGTTTGGCTGCTGAGTGTTGTTAGACAGGTAATTGAAGAGACGGATAAAAATATTGGTAAAGTTGGTCAGTTTGGCAGGCCTTTTTCTGTTGCTGATGATAGAAGCTCTATACGGTGGAAACTGGGTGAGGATGAACTTTCCGTGATACTGTATTTGATGGATATCTCCCATGATTTGGTATCAGCTGTCAAGTTCCTCCTTTGGTTGCTGCCGAGGGTTCTTAATAGCCCCAATTCCACAATTCATTCTGGGAGGAATGTGCAGATGCTAGCAAGGAATGCGGAAAACCAAGTTTGTGACGTGGGAGAGGCTTTTCTGCTTTCATCACTGAGAAGGTATGAGAACATTCTTGTTGCAGCAGATCTTATTCCAGAAGCCTTGTCATCTGCAATGCATCGAGCTGCCACAATTGTTGCATCTAATGGAAGAGTTTCAGGGTCAGGGGTCCTAGCTTTTGCTCGGTACTTGTTGAGAAAATATGGCAATGTGGCTAGTGTCATTGAGTGGGAGAAAACTTTTAAGGCTACATGTGACACAAGACTTTCCTCTGAACTTGACTCTTGTAGATCAGTGGATGGAGAGTTAGGGCTGCCCCTAGGTGTTCCAGCAGGAGTAGAAGACCATGATGATTTTTTCCGTCAGAAGATCAGTGGTGGTCGGTTGCCATCCAGAGTAGGTGCAGGCATGAGGGAGGTAGTGCAGCGTAATGTTGAAGAAGCATTCCGCTTTCTTTTTGGAAAGGATAGAAAGCTCTTTGCTGCTGGTACACTAAAAGGTCTTCCTCCTGTAGAAAAATGGGACAATGGATATCAAATTGCTCAACAAATAGTTATGGGTTTGATTGATTGCATAAGGCAGACTGGTGGTGCTGCTCAAGAAGGAGATCCCTCTTTGGTCTCTTCTGCAGTTTCTGCAATTGTTGGCAGTGTTGGTCCAACTTTAGCAAAAATCCCTGATTTTTCATCTGGCAGCAATCATTCGAATATAACATCAGCTTCAAATTTATTGAACGATGCCAGGTGCATTCTGCGAATGCATATAACCTGTCTAGGCCTGCTTAAGGAAGCCTTAGGAGAACGACAAAGCCGTGTATTTGATATTGCACTTGCTACTGAAGCTTCTACTGCTCTAGCTGGCGTTTTCACTCCTAGTAAAGCATCTCGTTCTCAGTTTCAAACATTTCCTGAAGTCCATGATTCTAGTAACACTATTTCAAATGATATGGGAAGCAACTCTAATAAAGTCGTGGTAGCAAAAACCACAAAAATTGCTGCTGCTGTTTCTGCGCTTTTTGTTGGTGCAATTATATATGGTGTTACCAGCCTGGAAAGAATGGTAACAGTTCTCAGATTGAAGGAGGGTCTCGATGCAGTACAATTTGTAAGAAGCACTAGATCCACTTCAAATGGAAATGCTCGTTCAGTTATGGCTTTTAAGATGGATAGTTCAATTGAAGTTCATGTCCATTGGTTTAGACTGCTAATTGGAAACTGCAGAACAATATGTGAAGGGTTGGTGGTGGAACTCTTGGGTGAACCATTTATTATGGCTCTTTCAAGGATGCAACGTATGCTTCCTTTAAATTTGGTCTTTCCACCTGCTTATTCAATATTTGCCTTTGTTAGGTGGCGGCCTTTCATTTTGAATGCTACAGTTCGTGAAGACATGAATCAAATTTATCAGTCTCTTATAGTGGCCATAACTGAAGCAATAAAGCATTTGCCTTTTCGTGATGTATGTTTTAGAGATTGTCAGGGTCTTTATGATCTTATGTCGGCAGACAATAGTGATTCTGATTTTGCAAACCTGCTAGAGTTTAATGGTTCTGACATGCATTTAAAACTCACAGCATTTGTTCCTCTACGCTCTAGGCTTTTCCTTAACGCCATTATTGATTGTAAGATGCCACAGTCTATTTATGCAAAGGATGATGGGAGCCGGATTTCTGGACCTGGTGAGTCTAAAGTTAAACCCACAGATAGTGGGTCTAAGCTTCAGGACATGCTTGTGCATGTTTTGGATACCTTGCAACCAGCTAAATTTCATTGGCAGTGGGTTCTCCTCAGGTTACTTTTAAATGAACAAGCCCTCATTGAAAAAGTGGAGAATCATGATGTGCCCTTGGCTGATGCTATAAAGTTGTCCTCACCTAGTCCTGAGAAGGCTGCTAGTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACTAGGTTACTGGTTAGACCTGATGCTGCACCCCTTTTTGCAGAATTGATTCATCTCTTTGGTAGGTCACTAGAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGCCAGGATGTCCTCTTTGGCCGGAAGGCCATTAGACAAAGGCTGCATAACATTGCTGTTAATAAAAAACTTTCTGTTAAGACCCAATTTTGGGAACCTTGGGGTTGGTGTAGTCCGACTACTGATTCATTGACTATCAAAGGGGATAACAAGAAGTTTGACAGCACCTCTCTTGAAGAAGGAGAAGTTGTTGAAGAGGGAACATATTTGAAAAGGTGCCAGCAGCAAGTGATTGAGAGGGCTCTTACCGAGTTGCTTCTTCCTTGCATAGATCAAAGTTCTGATGAAGCTCGCAATTCTTTTGCAACTGACTTGGTGAAACAGTTGAGTTATATTGAGACACACATAACTGCTATTACAGGTGGAAGTAAACCAGTGGGAAGTGCTCTTGCTGGAGTTGAAGGTCAGCCAAATAAAGTAAATAACCGCAAAAATTTCAGAACTGGAAGTGCTGCATTATCTAGACGACCAACAGTGGCAACAGATTCTGCTCCACCATCTCCTGCAGCCCTACGAGTTTCTATGTCATTACGTTTGCAGATTCCTGTTGAACTTGTTAATGTGAAAGAAATTCTATGGTTTTTTGTTCTTGAAATGGAGAAAATTGCAATGCAATTCAGGGAGCCATCTGTGCGGAGCACAAGACAATTTCTTGCCTCTGTTATTTTTCGTCTCCTTGGTAGTCGGGTTGTGCATCAGGATGCAGACATTTCAGCAAATGCTGTGCCTCTGCCAACGAGGGAGGCAGAGTCATCTTCTGAAGTTGCTTCTGCTGCTTTTGTGGATTCTTCTTCTCAGAGTCTGTTTGATCGTTTGCTGTTGGTTTTACATGGGTTGCTAAGTAGTTATCCTCCAAGTTGGCTCCGACCAAAGTCTTCAAAGACAAGCAATGAACCTACAATTGATCGAGAATTGTTGGAGACTTTGCAGAATGAATTGGATCGTATGCAACTACCAGACACTGTTCGGTGGCGAATCCAAGCTGCAATGCCAGTACTCATCCCGTCTATGCGGTGCTCTCTATCCTGCCAGCCACCATCTGTTTCAAATTCTGCTCTTATGTGCATTCAACCGGGCACTACAAATCCTGGGGTTAACCCCAGTAGCTCAACTATCCCCCAGAGGGGTCCAGCTCTATCAAGGGTTGCATCTAATGTATCAGGGAAGCCAAAACGACAGGACAATGATTTGGAAATTGATCCTTGGACTCTTTTAGAAGATGGCGCTGGCTCTATCCCTCTGGCAGGTAATACTGCTAGCCTAGGAAGTGGTGATCATGTTAACATTCGAGCCGCAAGCTGGCTTAAAGGAGCTGTAAGGGTGAGACGGACCGACCTCACATATGTTGGTGCGGTAGATGATGATAGTTGA 7005 0.4287 MQRYHAGSCTSAVNNSAIGGPSTRDTGRSDSPSLPANFSVSSRRQPPLNPYKLKCDKEPLNSRMITKQYAISFSGCSCASDLRGMDCPGLRYHLGGGVVSIAGSVVATTGVQEGSKATVQSTTKPNGGAHTLGETVILCFKEKGRGLMFPGGPSDIPSSVARETLGAPDFHPQTSNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKNVILTCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLARSGIFPELRPCGEDFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRSDVWTKDVINYLQALLDEFLSKNVSHSASHGRERSPQIPGPLQNKSDPLLSVTDGEGPSLHFRWWYIVRLLQWHHAEGLLHPSLVIDWVFTQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALRVVRDPAPGGSDLVDNSRRAYTTCAVIEMLQYLILVVPDTFVALDCFPLPSSVISHTMNDGNFVLKSTEAAGKVKNSSDDFGRIISRIQKHTEDLAKASIPGSPGHCLAKVAKALDKALVLGDLHVAYKFLFDDLCGGTVSEGWVAKVSPCLRLSLKWFGTVNTPLIYSVFFLCEWATCDFRDFRGSPPHDIKFTGRKDLSQVHIAVRLLKMKIKDVKISLKQTNEYHRASRFAKNSGQRPNSNHVGKSSRLKSSSKSTGSSVIFESPGPLHDIIVCWIDQHVVHKGEGSKRLQLFMVELIRAGIFYPLAYVRQLIVSGIMDANVNLVDMERRRRHYRILKQLPGCFIHDVLEESGIVDGVHLKEALQIYLNERRLILRGPLSESHDDASGTDLPPLKRKKYPASIKDEVSGITIDQRNVISTTKNVKDNAKIEELRTAISVLLQLPNCSSNLSATGCDESEGTVRRSIGSQNSKIDPVEGTPGCEECSRTKRQKLSEERNSFVQGHSPVQSDDDDAWWVKKGMKSPEPLKVDQPQKLTKQVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCGSKVNCPHHKTAMDVDGQRSVDIIPTSHFGDIVSIGKALKQLRFVEKRAIAVWLLSVVRQVIEETDKNIGKVGQFGRPFSVADDRSSIRWKLGEDELSVILYLMDISHDLVSAVKFLLWLLPRVLNSPNSTIHSGRNVQMLARNAENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMHRAATIVASNGRVSGSGVLAFARYLLRKYGNVASVIEWEKTFKATCDTRLSSELDSCRSVDGELGLPLGVPAGVEDHDDFFRQKISGGRLPSRVGAGMREVVQRNVEEAFRFLFGKDRKLFAAGTLKGLPPVEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKIPDFSSGSNHSNITSASNLLNDARCILRMHITCLGLLKEALGERQSRVFDIALATEASTALAGVFTPSKASRSQFQTFPEVHDSSNTISNDMGSNSNKVVVAKTTKIAAAVSALFVGAIIYGVTSLERMVTVLRLKEGLDAVQFVRSTRSTSNGNARSVMAFKMDSSIEVHVHWFRLLIGNCRTICEGLVVELLGEPFIMALSRMQRMLPLNLVFPPAYSIFAFVRWRPFILNATVREDMNQIYQSLIVAITEAIKHLPFRDVCFRDCQGLYDLMSADNSDSDFANLLEFNGSDMHLKLTAFVPLRSRLFLNAIIDCKMPQSIYAKDDGSRISGPGESKVKPTDSGSKLQDMLVHVLDTLQPAKFHWQWVLLRLLLNEQALIEKVENHDVPLADAIKLSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFAELIHLFGRSLEDSMLLQAKWFLGGQDVLFGRKAIRQRLHNIAVNKKLSVKTQFWEPWGWCSPTTDSLTIKGDNKKFDSTSLEEGEVVEEGTYLKRCQQQVIERALTELLLPCIDQSSDEARNSFATDLVKQLSYIETHITAITGGSKPVGSALAGVEGQPNKVNNRKNFRTGSAALSRRPTVATDSAPPSPAALRVSMSLRLQIPVELVNVKEILWFFVLEMEKIAMQFREPSVRSTRQFLASVIFRLLGSRVVHQDADISANAVPLPTREAESSSEVASAAFVDSSSQSLFDRLLLVLHGLLSSYPPSWLRPKSSKTSNEPTIDRELLETLQNELDRMQLPDTVRWRIQAAMPVLIPSMRCSLSCQPPSVSNSALMCIQPGTTNPGVNPSSSTIPQRGPALSRVASNVSGKPKRQDNDLEIDPWTLLEDGAGSIPLAGNTASLGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS 2334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 1 52 - -
Vimu9g00302 2334 SMART Med12_2 259 320 IPR019035 GO:0003712|GO:0006357|GO:0016592
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 1 46 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 1013 1032 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 932 955 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 932 1032 - -
Vimu9g00302 2334 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 64 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 2241 2276 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 2241 2268 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 963 977 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 374 395 - -
Vimu9g00302 2334 Pfam Transcription mediator complex subunit Med12 261 320 IPR019035 GO:0003712|GO:0006357|GO:0016592
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 709 738 - -
Vimu9g00302 2334 MobiDBLite consensus disorder prediction 991 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00302 Vimu-Chr9 3665544 3679582 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00302 - - gmx:100781696 3628.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00302 9 3665544 3679582 Vimu9g00302 9 3665544 3679582 ECH