Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00221 ATGGACTTTTTGGGGAAAGTTGTCGAAGGACTGATTGATTTTGTATGGAAACATGGTGTTCGACAGGTGACTTACATTGTCAATTACAATAAAAATGTCTTTGAATTAAAAGATAGTGTTAAGGATCTTGCATTAGAAAAAGAAAGGATAAATCATCAACGTGACGAGGCTGAGAAAAATCTAAACAACATTGAAGGAAAGGTTATTGAATGGGATCGCAAGGTGAGTGAAATCGAGACCACAGTAGAGGTGTTTAAGAACGATGATGGCCACACAAGGGCCCGATCACCCAATTGTTTTGTATTTCCGTACTTATGGAACAGACACCGGTTAGGAAGACAAGCACATAAGATGAAAGAGGATGTTAAAAGGCTAATTGGTGAGTCCCCTGAGCTTGATGAAGTTTTCTATAAGCAAAATGTAACATCTAATGATGCCACATTGTCTAATTATGGTTTTGTAGAATTTAGTTCTATAAAATCCATAATAGAAAAAGTAATGATCCAACTTCAAGATTCTACGGTGAGAATGATTGGATTGTATGGGAGAGGGGGTGTCGGTAAGAGCACTTTAGTCAAAGAAATTGCAAGGAAGGCTAAAGAGAAAAAGTTGTTTGATGTGGTTGTTAAAGTAGAGATAACAGCTGACCCCAATCCACATAAAATTCAGGAAGAAATTGCTTACGTGTTAGGATTAAGATTGGAAGGGGAAGGTGAAAATGTGAGAGCTGACTGTCTACGAAGGAGGTTAAAGAAAGAAAGAGGGAACATCCTTTTAATCTTGGATGACCTGTGGCACAAATTAGATCTAAATAAGTTAGGGATTCCAGTTGAAGATTATGATGATGATGAAGATTTTAATCGCCAAAAGCCGGATAATAAAGATGGTAACAATGATCCTAGTAGCAAAGTTTCGAAAAAAGAAAATATCCCCGGTGGTCACAAGGGGTGCAAGGTTTTACTAACTTCACGGGATAAAAATGTGTTGTGTGTTGAAATGGATGTAAAGTCAACTTTTTGTGTAAGGGAATTAGATGATAAGGATGCTTTAATTTTGTTTCAAAAGTTGGCGGGAATACATAATGAAATGTCTAGCTTTAAACAAGAAATTGTGAAGAAGTATTGTGAAGGATTACCCATGGCAATAGTTGTAGTTGCAAGGGCATTAAGAAACAAGAGTGAGTCAGTGTGGGAAGAAACAATAAAAAGACATAAAAAGCATGAATTGGTGGGTGAGGGGACATCTATGGATATTTCAGTGAAGATGAGTTATGACCATCTTGAAAATGAAGAAATCAAGTTTATTTTCTTACTTTGTGCTCAAATGGGTCGTCGGGCATTAATCATGGACTTAGTGAAGTATTCTTTTGGTTTAGGTATACTTGAAGGAGTCTCTTCGCTTTGGGAAGCTCGAGAAAAAATTAAGACATCAATCCAAAAGCTAAAGGACTCTGGCTTACTGTTGGACGAAAGTTCGAATAATCATTTCAACATGCATGACATGGTTCGAGATACTGCTTTGTCTATAGCACATAAGTATCACAACGCTTTTAATTTGAGAAATGGAAAACTAGATGATTGGCCCGAACTCGAAAAGTGCACTTCCATTTTTATGTGCAATAGTGATATCATTGATGGGCTTGAAGTCATAAATTTTCCTCAACTTAAACTTCTCCAAATCGACACTAATGATCCATATTTGAAAATACCCGAGGGTTTTTTTAGAAGCATGACAAATCTGAGAGTTCTAATAATGACTGGTTTTTATGTATCAAACTTTCCAGATTCAATTCGATACCTATCAAAACTCAGAATGCTTTGTTTTCAGCGATGTACTTTAAAATGCGACCTATCTATAATAGGAAAGCTGAAAAAATTGAGAATTCTTAGCTTCTCTGGATCTCTACTTAAAAGTTTGCCAGCTGAGTTACATTGCTTGGATAAGTTACGAATGCTAGATATCAGTGATTGTTCTGAACTGAAGATTATTCCACCTAATATTATATCAAGTTTAACATGTTTGGAAGAGCTATATATAAGAGAAAGCTTGATCAAAATGTTGGTGGAAAGAGAGACAAACATAGGTCAAGATTTGTTGCTTTCCGAGTTAAAGAATTTACATCAATTGAAAGTGATGGAGTTAAGCATCCCATGTGTTTCAAATTTCCCCAATCACTTGTTCTTTGACAAGTTAAGAGATTACAATATTGTGATTGGTGACTTTGATTTCTTTTCTCTTGGAGAATTTAAGATCCTCAATAAGCATGAAACATCCAGAGTTTTAGCAGTGCAACTAAAGGATAACACTAACATTCATTCCCAGGAAAACATAAAATTGTTGTTTAAAACAGTACAAACTTTGTTGTTGGGAAAGACAAATGGTGTTCGAGAAGTTGTCAATGATTTGAATGTAGATGGATTTCAAGATCTGAAACACTTATCCATCATAAATAACAATGACTTCGAATATGTCAATTCAACAAAATTGTGTAATTATGTGAATGTTTTTCCCAATTTGGAATCTCTTTGTCTCTACAATCTGGGGAAGTTAGACATGATATGTTATGGTCCAGTTACAGTTGTGTCATTTGCCAAATTACGAACCATCAAGGTTGAGATGTGTCAACGATTGAAGAATCTCTACTCCCTTGACATGGTTAAGTTTCCTGTTAGTGCGCAAACATGTGATATTTCTGAATGTAATTCTTACATGGATATATTTCTTTCTAGTATAGAGATAATTGAAGTTTCTGAATGTAAATCTTTAAAGAAGATCCTTCAAATTCCAAAGCATTGCAGAAAGGTTGAGTTTCTTAAGTTGCACACTTTGACACTCCGATTATTACCATTGCTTTCATCCTTTTGTACCGAAGTGGATAAATTTTGCTGGCCACATCTAACAAAGGCTCAAACTACAATTATGGGTCACAAAGATCTTACGGGTGAGGAAGATAAACAGAGTGATGAGGAACCTCCTCTTTTTGGTGAACTGGTATGA 2997 0.356 MDFLGKVVEGLIDFVWKHGVRQVTYIVNYNKNVFELKDSVKDLALEKERINHQRDEAEKNLNNIEGKVIEWDRKVSEIETTVEVFKNDDGHTRARSPNCFVFPYLWNRHRLGRQAHKMKEDVKRLIGESPELDEVFYKQNVTSNDATLSNYGFVEFSSIKSIIEKVMIQLQDSTVRMIGLYGRGGVGKSTLVKEIARKAKEKKLFDVVVKVEITADPNPHKIQEEIAYVLGLRLEGEGENVRADCLRRRLKKERGNILLILDDLWHKLDLNKLGIPVEDYDDDEDFNRQKPDNKDGNNDPSSKVSKKENIPGGHKGCKVLLTSRDKNVLCVEMDVKSTFCVRELDDKDALILFQKLAGIHNEMSSFKQEIVKKYCEGLPMAIVVVARALRNKSESVWEETIKRHKKHELVGEGTSMDISVKMSYDHLENEEIKFIFLLCAQMGRRALIMDLVKYSFGLGILEGVSSLWEAREKIKTSIQKLKDSGLLLDESSNNHFNMHDMVRDTALSIAHKYHNAFNLRNGKLDDWPELEKCTSIFMCNSDIIDGLEVINFPQLKLLQIDTNDPYLKIPEGFFRSMTNLRVLIMTGFYVSNFPDSIRYLSKLRMLCFQRCTLKCDLSIIGKLKKLRILSFSGSLLKSLPAELHCLDKLRMLDISDCSELKIIPPNIISSLTCLEELYIRESLIKMLVERETNIGQDLLLSELKNLHQLKVMELSIPCVSNFPNHLFFDKLRDYNIVIGDFDFFSLGEFKILNKHETSRVLAVQLKDNTNIHSQENIKLLFKTVQTLLLGKTNGVREVVNDLNVDGFQDLKHLSIINNNDFEYVNSTKLCNYVNVFPNLESLCLYNLGKLDMICYGPVTVVSFAKLRTIKVEMCQRLKNLYSLDMVKFPVSAQTCDISECNSYMDIFLSSIEIIEVSECKSLKKILQIPKHCRKVEFLKLHTLTLRLLPLLSSFCTEVDKFCWPHLTKAQTTIMGHKDLTGEEDKQSDEEPPLFGELV 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00221 998 SUPERFAMILY L domain-like 498 924 - -
Vimu9g00221 998 Gene3D - 136 336 IPR027417 -
Vimu9g00221 998 Coils Coil 40 74 - -
Vimu9g00221 998 Pfam NB-ARC domain 311 410 IPR002182 GO:0043531
Vimu9g00221 998 Pfam NB-ARC domain 163 279 IPR002182 GO:0043531
Vimu9g00221 998 SMART AAA_5 174 339 IPR003593 GO:0016887
Vimu9g00221 998 MobiDBLite consensus disorder prediction 977 998 - -
Vimu9g00221 998 MobiDBLite consensus disorder prediction 977 991 - -
Vimu9g00221 998 MobiDBLite consensus disorder prediction 281 310 - -
Vimu9g00221 998 Gene3D - 343 428 IPR042197 -
Vimu9g00221 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 439 IPR027417 -
Vimu9g00221 998 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 24 966 - -
Vimu9g00221 998 Gene3D Ribonuclease Inhibitor 476 968 IPR032675 -
Vimu9g00221 998 PRINTS Disease resistance protein signature 644 660 - -
Vimu9g00221 998 PRINTS Disease resistance protein signature 177 192 - -
Vimu9g00221 998 PRINTS Disease resistance protein signature 251 265 - -
Vimu9g00221 998 PRINTS Disease resistance protein signature 375 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00221 Vimu-Chr9 2731149 2734145 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00221 - - var:108346440 1794.63