Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00216 ATGGCGTCTTTGTTGCGAGCGAGAAACGCTTTTCGTGGCTCTATGGCTAGTCTTCTGCGGGGCTTCAGCAACGTTCCTGAGAACACCGTCTATTCGGGTCCCATGGCGCAGACCCCGAACAAGCGAGTCACGCTCAGGCATTTGAGAGAGAAGCACAAATCATCCCAACCTATCACCATGGTCACCGCATACGATTACCCCGCCGCCGTCCATCTCGACACCGCCGCCGTCGACATCTGTCTCGTAGGCGACTCCGCCGCCATGGTGGTCCACGGCCACGACACCACGCTTCCCATCACGCTCGACGAGATGCTTGTCCACTGCCGCGCCGTGGCACGTGGCGCCAAGACGCCGCTCCTCGTCGGGGACTTGCCTTTCGGAACCTACGAGTCCGATCCCAATCAGGCGGTGGATACAGCGGTTAGGATTCTGAAGGAAGGGGGAATGGATGCGATAAAACTCGAAGGAGGGTCTCCTTCCAGAATTGTTGCAGCGAAGGCTATTGTTGAGGCTGGAATTGCTGTGATGGGCCATGTGGGTCTTACTCCTCAGGCCATTAGTGTTTTAGGGGGGTTTAGACCTCAAGGAAGAAATGTTGCCAGTGCTGTCAAGGTTGTAGAGACTGCATTAGCTTTGCAAGAAGCAGGGTGTTTTTCTGTTGTTCTGGAATGTGTGCCTCCGCCCATTGCCGCCGCAGCAACGGCAGCCCTTCAAATTCCCACAATTGGAATTGGTGCTGGACCCTTTTGCAGTGGACAGGTGTTGGTTTACCATGATCTGCTTGGTATGCTACAACACCCTCACCATGCAAAGGTCACTCCAAAATTCTGTAAGCAGTATGCACGTGTAGGAGACGTCATCAATAAAGCTTTACTGGAGTATAAGGAAGATGTTACAAATGGTTCGTTTCCTGATGTTCACCATAGCCCGTACAAAATAAGCAAGACAGATGCAGATGCTTTTTCAAGTGAGTTGCAGAAGTTAGGTTTGGACAAGGCAGCGTCCGCAGCATCTGAAGCAGTTCAGAAAATGGATACGGCTTAG 1044 0.5259 MASLLRARNAFRGSMASLLRGFSNVPENTVYSGPMAQTPNKRVTLRHLREKHKSSQPITMVTAYDYPAAVHLDTAAVDICLVGDSAAMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYESDPNQAVDTAVRILKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSVVLECVPPPIAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVTNGSFPDVHHSPYKISKTDADAFSSELQKLGLDKAASAASEAVQKMDTA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00216 347 Pfam Ketopantoate hydroxymethyltransferase 42 305 IPR003700 GO:0003864|GO:0015940
Vimu9g00216 347 NCBIfam 3-methyl-2-oxobutanoate hydroxymethyltransferase 42 309 IPR003700 GO:0003864|GO:0015940
Vimu9g00216 347 CDD KPHMT-like 45 304 IPR003700 GO:0003864|GO:0015940
Vimu9g00216 347 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 42 308 IPR015813 GO:0003824
Vimu9g00216 347 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 35 327 IPR003700 GO:0003864|GO:0015940
Vimu9g00216 347 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 43 310 IPR003700 GO:0003864|GO:0015940
Vimu9g00216 347 Gene3D - 40 322 IPR040442 -
Vimu9g00216 347 FunFam 3-methyl-2-oxobutanoate hydroxymethyltransferase 40 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00216 Vimu-Chr9 2669056 2672447 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00216 K00606 - gmx:100808841 597.43