Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00212 ATGAGAGCATACTCTCAGCTTCAAAGTAATCAACTTGAAGCTGCAAATATTCAGTTATTTGTTAATCTGAAACTGCATATTCCGACTTCAAGGTGTGTGCGGTTTGAGAGATTTGTCTCTGAACGCATGAAATCTTTCAGTATTCACGGTCCTGAAGATAAGGGAATGACAAAACAGAATGTTAATACTAAGTTAAAAAAGTGGAGAAGTGTTTACTATTTTATCTTTATACCGGGTGCTCTTGCTCTTCTCCTCTCTGTTGCGGCCATGTCCAAGTTCCTCTCTTTCAAATCATTTCTCGGTACTGAGTCTTTATACTCAAATCTGAATCCTGAGGGGAATGAAAATGAAATGATGATGATAACTGTTGATATTGTGATTCAGAAAATTGAAGAGCAAATGGAAAAACTGAGGGAAACAAAACAGGATCGATCATCGTCATCATTTGCATTCCAGCAAGCTTCATTTCTTGCTGATATATTAGGACTTCTTGAGTCAGCAGCGACGTCTCATCAACACAATAAAGGGAATAATCAGCAAAATGATAGCTTCACCAGTCATCCTTTGGTGAGAAGAAAGAAACGATCAGATGAACCAGCCGATTACTTTCTGCGAGAAGAGATTCGCAAGTATGTCAGGATCAAGCCTAACAGATTAGGAAAACAAAATTTTATGGGTGCTAATGCAAGCTTCACCAGCATAGGCCATGCGTGCTTTGCCATGAAGGAAGAGCTTGAAGAATACATGGATTATGATGTGGGAGAGATCTGCAATGATGACTGGAAACTGGGTCAAAAGCTCATGGTTCATGGCTGTGATCCTTTACCAAGGAGAAGGTGCTTTTCAAGGGCCCCTAAGCTATACAACCAACCATTTCCTATCGCTGAATCATTGTGGAAACTCCCTGATGATAGAAATGTTAGATGGAGTCAATACCGGTGCAAGAACTTTGCTTGTCTCGCGGGCAACACCACTGGTAAGGGATTCTTCAAGTGTGCACACTGCTTCAACCTTACCAGCCATGAGATGCCTAGATGGATGAGCCTGGAATCTGATTCAAACCAGACAGCCGATTTCCTTATATCAGATGTTCTTGCAATTAAGCCAGGAGAGATCAGAATGGGATTGGACTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAATTCAATGTGACAATAGTTTCTGCCACAATCAATTTTGGAGCACCCTTCAATGAAATGATAGCTCTCAGAGGACTTGTTCCTCTCTACTTGACTATTAATCAGAGGCTTCCATTTTTTGACAACACCCTGGATTTGATTCACACAACTAGGTTTCTTGATGGATGGATTGATTTTGTGCTCCTTGAGTTCATATTGTATGACTGGGACAGAGTTCTGAGGCCAGGGGGTTTGCTTTGGATTGACAGTTTTTTCTGCTTGAAAGAAGATTTGTATGATTACTTGAAGGCCTTCAAAATACTGAGATATAAGAAACTCAAATGGGTGGTTGCTCCAAAGCTTGATAAAGATGATCAAGAAATGTTCTTTTCTGCTGTTTTAGAGAAGCCTCCTAGGCCATTCAGGTGA 1578 0.4087 MRAYSQLQSNQLEAANIQLFVNLKLHIPTSRCVRFERFVSERMKSFSIHGPEDKGMTKQNVNTKLKKWRSVYYFIFIPGALALLLSVAAMSKFLSFKSFLGTESLYSNLNPEGNENEMMMITVDIVIQKIEEQMEKLRETKQDRSSSSFAFQQASFLADILGLLESAATSHQHNKGNNQQNDSFTSHPLVRRKKRSDEPADYFLREEIRKYVRIKPNRLGKQNFMGANASFTSIGHACFAMKEELEEYMDYDVGEICNDDWKLGQKLMVHGCDPLPRRRCFSRAPKLYNQPFPIAESLWKLPDDRNVRWSQYRCKNFACLAGNTTGKGFFKCAHCFNLTSHEMPRWMSLESDSNQTADFLISDVLAIKPGEIRMGLDFSVGTGTFAARMREFNVTIVSATINFGAPFNEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLEFILYDWDRVLRPGGLLWIDSFFCLKEDLYDYLKAFKILRYKKLKWVVAPKLDKDDQEMFFSAVLEKPPRPFR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00212 525 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 353 488 IPR029063 -
Vimu9g00212 525 Coils Coil 123 147 - -
Vimu9g00212 525 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 96 523 - -
Vimu9g00212 525 MobiDBLite consensus disorder prediction 171 196 - -
Vimu9g00212 525 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 365 475 IPR004159 GO:0008168
Vimu9g00212 525 MobiDBLite consensus disorder prediction 171 186 - -
Vimu9g00212 525 Gene3D Vaccinia Virus protein VP39 345 503 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00212 Vimu-Chr9 2655085 2656762 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00212 - - var:108346439 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00212 9 2655085 2656762 Vimu9g00212 9 2655085 2656762 ECH