Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00196 ATGAAAGAAACTAGCAAAGAAGTTTACGATATCAAAAGTGAAAAGCACCTGGACGCGCCTCCCGAGGTAGACTTTGTGTCGCCCTGCTTCCACCGCGACGTCGTTGTTTCCGATTCTCTCGCAAGGATCGGGTGCTTCCGGCTGCTAAATCACGAGATTCCGTCACAATTGGTGTGGTGCAATGAGGAGGAGTTGAAGTTGAAAATGAAGGGAATTTGGCCCATTGGATATGCAAATTTCAGAATGGTGGCTATGAAAATGATGCATGTGATACTGAAAAAGAAGAGTGCAGAATTTGAGAGTGGGAATGAGAAAGGGAATGTTTGCTGCATCTATAAGCATGGTGGTGATAATACTAAGGATGCATTAGGTAATTCCTTGAAATATGATGTGATTAGAATGCTGATTAGGGGAACCGATTATTCTCATTCATCGTGCTTTCATCTATGCAATGGCTCTTCACAGTTTCATTTTTACTCCAAGAAAAGTTGGCTCTCTTTCTGCCCTGAACCAGGTGCTCTCATAGTCACTGCTGGAGATCAAATTCAGATATTGAGTGATGGACTGTACAAAAGTGTGATTGGAAGACCAATATTTAAAGCAGAGAAAAAACAGAGCATTTCAATGGCTTTCCTCTGTTCTCATCAAAACAAGAAGAATTTTGGAAGCCATGGGAGTAGAAGTGTTTCACTTTCCCAGCAAGCCATATTGGCTTTAATTCCGCCTCTTGTGTATCATGTCCAGCAGAAGTTCTTCATGGCTGACGCTATTTTCAGAGGTACTAGAGTGACCTTTAATATAGCATACATGACAGTATTTAACATAGAAACCAATCCTGTTCATGCCCTTGTTGCTTTCATCTTCTTTGTTCTTCTTGGTTTTCTCCAAATCAGATATACCCAAAATCCTAACCCTTTTCACCTTCATCCAAAGACCATTTGGCTTTCCATTGCTACCTTTCTTCTCTATTGCATGACCTTCTTGGGTACCCTCAACTTTGGCATCAGGGTTCATCACCTTCGCACTCTCATGCAAGCCTTTGCTTCACTCTCTTTGATTTCCTTGCTAGTGCTCTTGCTACCTGACACTTGGGAATCATTAGTTCAAATTTTGAGTGTTGGGAGTCTTTACATATATTGTAATGCTGCATATGCTTCTATACTTGATTATTACTAG 1176 0.4107 MKETSKEVYDIKSEKHLDAPPEVDFVSPCFHRDVVVSDSLARIGCFRLLNHEIPSQLVWCNEEELKLKMKGIWPIGYANFRMVAMKMMHVILKKKSAEFESGNEKGNVCCIYKHGGDNTKDALGNSLKYDVIRMLIRGTDYSHSSCFHLCNGSSQFHFYSKKSWLSFCPEPGALIVTAGDQIQILSDGLYKSVIGRPIFKAEKKQSISMAFLCSHQNKKNFGSHGSRSVSLSQQAILALIPPLVYHVQQKFFMADAIFRGTRVTFNIAYMTVFNIETNPVHALVAFIFFVLLGFLQIRYTQNPNPFHLHPKTIWLSIATFLLYCMTFLGTLNFGIRVHHLRTLMQAFASLSLISLLVLLLPDTWESLVQILSVGSLYIYCNAAYASILDYY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00196 391 Pfam 2OG-Fe(II) oxygenase superfamily 145 213 IPR044861 -
Vimu9g00196 391 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 57 249 - -
Vimu9g00196 391 Gene3D - 82 236 IPR027443 -
Vimu9g00196 391 SUPERFAMILY Clavaminate synthase-like 37 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00196 Vimu-Chr9 2496078 2499674 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00196 - - gmx:100799796 296.589