Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00185 ATGAGTCATGTGGTGAGAATAACAGGAGGTCCTAGTAATAGGTGCTACGTGGAGGCCTATTATTTGTCGGGTGAAACCCCTCGACAATGGCTTTGCAAAGCAGTAGGGCCACAACAAGTTCGGTTCGTCGTTAGACGCATGAAAGATTCGAATTCGGATCTATTTGACCCGGTTGTGGCCATGGAATCCGACTGGTCTCGCGCTGGTTCCACCTCCGACGCCGATTTCGCCTTCGCCTTCAACGACAGCAATTTCTCCGACAGGGTTCTTCGGATCGAGATCATGGCTGACCCTGCTGACGCCGGAACCGATTCCGACGGTTGCGCCACCATTGCCGATTGGGCGCGCCACCGCAAGCGTCGCCGTGAGGATATCAGAAAGGACACAGGCACGGAACCTGCTGCTGTGCCAGACGAGCACATTTTGAACGGGAATCAACCTGATGTGGATGAGCGTGAAAACCAAGATGAGGAGGCTGTTGCAATGGTTGAAGAACCTCATTCTGGTGATGAAGCTACAAATAGTCATGATTCGGACTGGAGCATGGACTGCTCTGCAGGTGCCGTTGTTAGAGTTAAAACGCTGCACATAAGTTCTCCTATCTTGGCTGCTAAAAGTCCTTTCTTTTATAAGCTTTTCTCAAATGGGATGAGGGAGTCTGAGCAGAGACATGTCTCCCTCAGAATTAATGCCTCAGAAGAAGCTGCTCTCATGGAGCTGCTGAACTTTATGTACAGTAATACCTTGACCACTACTACGGCACCTGCTTTGCTGGACGTGTTGATGGCTGCTGACAAATTTGAAGTTGCTTCGTGCATGAGATACTGTAGCCGGTTATTGCGGAACATGCCTATGACACCTGACTCTGCTTTGCTTTATCTGGAGCTTCCATCTAGTGTCTTAATGGCCGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTGGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTCATGGCCTTGCCCCTAGCTGGAGTAGAGGCAATACTGTCTAGCGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGATTTTGTGTTGAAGTGGTCTCGACAGCAGTACCCTAAACTGGAAGAAAGGCGAGAAGTCTTGGGTGCCCATCTTGCTCGTTTAATTCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTATTAACCTGTTCTGACTTCGACCATGATGTTGCATCCAAGCTTGTACTGGAGGGCCTATTTTTCAAGGCTGAAGCTCCACACCGCCAACGGGCACTGGCAGCGGAAGACTCTGCTTCTTCAAACCGTAGATTTGTGGAGAGGGCATATAAGTACCGACCGGTGAAGGTGGTTGAATTCGAACTTCCCCGGCAGCAGTGTGTGGTGTACTTGGATCTAAAGAGGGAGGAGTGTGCCAATCTATTCCCATCTGGGCGGGTATATTCTCAGGCATTCCATTTGGGTGGTCAAGGTTTTTTCCTATCAGCACATTGTAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAGAAGGGGTCAGTGAGCTTTGCTGTTGACTATGAGTTTGCTGCAAGGTCTAGGCCAACGGAAGAATTCGTTAGCAAGTACAAAGGTAACTACATGTTCACAGGGGGAAAGGCCGTTGGGTATAGAAACTTGTTTGCCATTCCATGGACATCGTTTATGGCTGAGGATAGTCTTTACTTCATCAATGGTGTCCTCCATCTTAGAGCTGAGCTCACCATCAGGCACTGA 1791 0.4891 MSHVVRITGGPSNRCYVEAYYLSGETPRQWLCKAVGPQQVRFVVRRMKDSNSDLFDPVVAMESDWSRAGSTSDADFAFAFNDSNFSDRVLRIEIMADPADAGTDSDGCATIADWARHRKRRREDIRKDTGTEPAAVPDEHILNGNQPDVDERENQDEEAVAMVEEPHSGDEATNSHDSDWSMDCSAGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVSLRINASEEAALMELLNFMYSNTLTTTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRQQYPKLEERREVLGAHLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYMFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00185 596 CDD BTB_POZ_ZBTB_KLHL-like 189 267 - -
Vimu9g00185 596 PANTHER OS02G0260700 PROTEIN 63 595 IPR045890 -
Vimu9g00185 596 FunFam BTB/POZ domain-containing protein POB1 318 422 - -
Vimu9g00185 596 ProSiteProfiles BTB domain profile. 184 253 IPR000210 GO:0005515
Vimu9g00185 596 MobiDBLite consensus disorder prediction 119 134 - -
Vimu9g00185 596 SUPERFAMILY TRAF domain-like 483 594 - -
Vimu9g00185 596 Gene3D Potassium Channel Kv1.1; Chain A 173 302 IPR011333 -
Vimu9g00185 596 Pfam BTB/POZ domain 191 281 IPR000210 GO:0005515
Vimu9g00185 596 FunFam BTB/POZ domain-containing protein POB1 175 305 - -
Vimu9g00185 596 MobiDBLite consensus disorder prediction 119 159 - -
Vimu9g00185 596 Pfam BTB And C-terminal Kelch 307 399 IPR011705 -
Vimu9g00185 596 SMART BACK_2 299 401 IPR011705 -
Vimu9g00185 596 Gene3D - 316 421 - -
Vimu9g00185 596 SUPERFAMILY POZ domain 193 281 IPR011333 -
Vimu9g00185 596 SMART BTB_4 184 284 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00185 Vimu-Chr9 2294077 2300043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00185 - - gmx:100776595 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00185 9 2294077 2300043 Vimu9g00185 9 2294077 2300043 ECH