Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00171 ATGTTTGGTACAAACTCATTTTTTAACCAACTGGAAATAATATCCTCCGTTTATCATAATCAGTGGGATGCTGTTGAAAACAAGTCCACAGTGCTTATCTATGGTGGTGGGGCTTTAGTTGCTGTTTGGCTATCTTCCATTCTTGTGAGCGCAATCAACTCAGTTCCCTTGCTTCCAAAGATCTTGGAGTTGGTAGGTCTAGGATACTCTGGATGGTTTGTCTACCGATACCTTCTGTTCAAGTCTAGCAGGAAGGAGCTGGCTACAGACATTGAGGGACTGAAGAAGAAAATTACTGGAACTGAATAG 309 0.4207 MFGTNSFFNQLEIISSVYHNQWDAVENKSTVLIYGGGALVAVWLSSILVSAINSVPLLPKILELVGLGYSGWFVYRYLLFKSSRKELATDIEGLKKKITGTE 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00171 102 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 19 100 IPR025564 -
Vimu9g00171 102 Coils Coil 84 102 - -
Vimu9g00171 102 PANTHER - 19 101 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00171 Vimu-Chr9 2061196 2061940 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00171 - - gmx:100775367 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00171 9 2061196 2061940 Vimu9g00171 9 2061196 2061940 ECH