Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00169 ATGGGTACCCTTAAGGTGTCCTACAGTTCATGCACATTTTCAAAATTCTTGGTAATTTGCATGGTGGCATTTTCTTTGGTTGATTCAAGTTATGGTGACTGCGATTTTAAGGCAATCTTCAATTTTGGGGATTCAAATTCGGATACTGGTGGGTTTCATGCAGCCTTTCCTGCACAGCCTGATCCCTATGGAATGACCTTTTTCAAAAAACCAGTTGGTCGTGCTTCTGATGGAAGGCTCATTCTTGATTTTCTTGCTCAGGGTCTAGGGCTTCCATTTTTGAGTCCATATCTTGAGTCTATTGGATCAGACTATAGCCATGGAGCTAACTTTGCATCTTCAGCTTCAACTGTGATTCCTCCCATTACTTCCTTCTTTCACAGTGGACTCAGTCCATTTTCCCTTTCCATTCAACTCAGCCAAATGAGACAATTCAAAGCAAGAGTTGATGAATTTCATAAAACAGGAGCTTTATGCACAAGGGGCACGCACAATTATGGTGTTCAATCTTGGTCCTGTGGGATGTTATCCAGGATATTTGGTGCAGCTTCCTCATGCTCCTTCTGA 567 0.4215 MGTLKVSYSSCTFSKFLVICMVAFSLVDSSYGDCDFKAIFNFGDSNSDTGGFHAAFPAQPDPYGMTFFKKPVGRASDGRLILDFLAQGLGLPFLSPYLESIGSDYSHGANFASSASTVIPPITSFFHSGLSPFSLSIQLSQMRQFKARVDEFHKTGALCTRGTHNYGVQSWSCGMLSRIFGAASSCSF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00169 188 Pfam GDSL-like Lipase/Acylhydrolase 39 154 IPR001087 GO:0016788
Vimu9g00169 188 Gene3D SGNH hydrolase 28 162 IPR036514 -
Vimu9g00169 188 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00169 Vimu-Chr9 2051960 2056642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00169 38 155 Acyl Lipid Metabolism Gene Families AT4G10950 35.200 1.10e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00169 - - gmx:100814956 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00169 9 2051960 2056642 Vimu9g00169 9 2051960 2056642 ECH