Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00167 ATGGAGGTTGGATTCTTAGGTTTGGGGATAATGGGCAAGGCTATGGCAACCAACTTGCTACGCCATGGCTTCAAAGTCACTGTTTGGAACAGAACCCTCTCCAAGTGTGAAGAACTTGTGCAACATGGTGCTTCTGTCGGAGAAACGCCAGCTACTGTAGTCAAGAAATGCAAGTATACAATTGCAATGCTATCTGATCCTTCTGCTGCTTTATCGGTTGTGTTTGATAAAGATGGTGTTCTTGATCATATTAATGGAAAAGGTTACGTTGACATGTCAACAGTTGATGCTGATACATCCTCCAAGATATCTGAGGCAATCAAAGCAAAAGGTGGTTACTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGCCAGCTGGTTATACTTGCCGCTGGGGACAAGCCATTCTCTAGTTATACTGTTAAATCTAGTTTTGTGGGAAATAAGGGAGCAACAACTGCCGAAAGTGTTGTTGCTACAAGAACGGATGAAGTCAGAGATGTGAATTTGAGGATTTCACAAAATTGGGCTAAAAGAATCCAGGAAGAGTGGAAGTCATTGGAGGAGGATCTCTCATATCGACCGCCACCCAAGCCCCCAGATTTAAAATTGCAAAAAGTAGCAGTGGTATTGGATGTTGTTGATTCTTTTGACATGCAGGCATTGTATGATGAAGCACTTCCAGCATTTGACATACTGGGGAAGAAGTCATTCTTTTTGGGTGACGTTGGAAATGGTGCAAAAATGAAACTTGTTGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGAACCCTGCAACCCTTCTTGATGTGCTGGATCTTGGTGCCATAAGTAACGGCATGTTTAAACTGAAAGGACCTACAATGCTTCAAAATAGTTACTCCCCAGCTTTTCCCCTAAAACACCAGCAGAAGGACATGAGGTTAGCTCTTGCTCTTGGAGATGAAAATGCTGTATCAATGCCAATAGCAGCTGCAGCAAATGAGGCTTTCAAGAAGGCCAGAAGTTTGGGGTTGGGAGACCTTGATTTTTCGGCAGTTCATGAAACTTACAAAGCACCTGATCGTTCATCTTGA 1131 0.4324 MEVGFLGLGIMGKAMATNLLRHGFKVTVWNRTLSKCEELVQHGASVGETPATVVKKCKYTIAMLSDPSAALSVVFDKDGVLDHINGKGYVDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLVILAAGDKPFSSYTVKSSFVGNKGATTAESVVATRTDEVRDVNLRISQNWAKRIQEEWKSLEEDLSYRPPPKPPDLKLQKVAVVLDVVDSFDMQALYDEALPAFDILGKKSFFLGDVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLNPATLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDLDFSAVHETYKAPDRSS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00167 376 Gene3D - 248 371 IPR013328 GO:0016491
Vimu9g00167 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 141 IPR036291 -
Vimu9g00167 376 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 247 370 IPR008927 -
Vimu9g00167 376 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 140 IPR006115 GO:0050661
Vimu9g00167 376 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Vimu9g00167 376 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 370 - -
Vimu9g00167 376 FunFam Putative oxidoreductase GLYR1 homolog 1 157 - -
Vimu9g00167 376 Gene3D - 1 147 - -
Vimu9g00167 376 FunFam Glyoxylate/succinic semialdehyde reductase 2 249 373 - -
Vimu9g00167 376 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 249 367 IPR029154 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00167 Vimu-Chr9 2006415 2016203 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00167 K18121 - gmx:100802847 281.952