Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00161 ATGGCTGTAAAGGAGAAGCTATCCACGAGAGAGAATAGTTTCAGAGTAGGAAGTATTGGGAGGAGACTTTGGGGTTTCTCAAGTACTCTGGGAAGTGTTCTAAATGATGCTGGATATGTTCCCTCTAATACAGAAAGGTATCCCCTAGGAGGCATTATCTCTGCCATTGAGAATGCTTTTCATGCGTCTCCTTTAATAATTTGCTCAAAAGATTATATTGAGGAACTTCGTCTATGCTTTTACAAGGACTTCCAGCCCCGAGATTGTGCTGTTAGTTCTGATGTTAAAATTGACATGGTTACTTCAAAAGGATGTCCCAAGTATGTTGGCTTGCCTGAGTCGGTTTCAGTAGATTGGAAAGGGGTCTTTCCTTTAGAAGGAGCTGCTTTTGTCCAGGTTTATGTTGAGGGCGCGACGGACTTCAAAGTCAGGCCTCTGATGATGCAGCTATATAAGGTTATGTATTATTTGGGAATTGGGAGCTGTCCCGAGCCTATTGCCATGTATTTGGACAATATAAGCCTCAATGTTTCTATCCCCTTTGATACAACCAACCTTCTCTGCCTTTCTGTATGGGATGCTCAAAGTTTCATCCTCAGATATGCTCAGACTTATGCAAACATTTGGAGTTTCATTCTTTCTACCCCAGACACAAATTCTTACATAGCCATGGGATTCTCTGTCAGTGGCGGCATGGTTGGTTCAAGTGCCATGGTGGGGTGGGTGGCATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGGGTCACTCCAAATCAGGTGGTTCCTGATAAGGGCAACCTACAGGTGATAGCCAATTCAACCTTCATCACTTTACAGAACTCTCGTCTGTTCATGGTGTTTCAGTTACAAACCGCTGATCCTTTGTCCTCGCTGATATTTGCCACTGGATCCACCGGTTTATTCCCTGCACCACCAAGCTTTGCACTAACCAAACACCTAGACAAGGTTTCCACAAGAATAGACTACTCAAAAGGTTAG 1011 0.4411 MAVKEKLSTRENSFRVGSIGRRLWGFSSTLGSVLNDAGYVPSNTERYPLGGIISAIENAFHASPLIICSKDYIEELRLCFYKDFQPRDCAVSSDVKIDMVTSKGCPKYVGLPESVSVDWKGVFPLEGAAFVQVYVEGATDFKVRPLMMQLYKVMYYLGIGSCPEPIAMYLDNISLNVSIPFDTTNLLCLSVWDAQSFILRYAQTYANIWSFILSTPDTNSYIAMGFSVSGGMVGSSAMVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIANSTFITLQNSRLFMVFQLQTADPLSSLIFATGSTGLFPAPPSFALTKHLDKVSTRIDYSKG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00161 336 ProSiteProfiles DOMON domain profile. 195 307 IPR005018 -
Vimu9g00161 336 Gene3D - 24 118 IPR036430 GO:0003723|GO:0033897
Vimu9g00161 336 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 186 335 - -
Vimu9g00161 336 CDD DOMON_DOH 188 323 IPR045266 -
Vimu9g00161 336 SMART DOMON_3 221 307 IPR005018 -
Vimu9g00161 336 Pfam Ribonuclease T2 family 30 89 IPR001568 GO:0003723|GO:0033897
Vimu9g00161 336 SUPERFAMILY Ribonuclease Rh-like 30 90 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00161 Vimu-Chr9 1883599 1887534 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00161 - - gmx:100804791 290.426