Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00160 ATGAAGATATCTGTAGCATTTCTCATGATCACTATTTGTTTACATGCTTCAGCCAACATTGGAAGTTCACAAGGGGATGGAAATTCTTCACAGGTAGATGGAAGTACTTCACAAGCACCAGACTCCTGTGTCTCCAATCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAATCTCAATTGTCTTCCTGTTTGGAATGCTCAGGGATATATCCTTAGATATTCTCAGACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCAAACACAAATTCTTATATAGCAATGGGGTTCTCTCCCAATGGAGGGATGGTGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAATGGCGCAGGTGGAGGCATGAAACAGTATTATCTAACAGGACTCTCACCAAACCAAGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTCACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCATTCCAGTTACAAACCAACCAACCTCTGTCACGGTTGATTTATGCCTTTGGACCTAACGGTGTGTTCCCTTCACCACCAAGTTTTGCATTAACACAGCACCAAGACAAAGTCTCCGTTACGTTGAATTACGCAACAGGTTAG 633 0.4376 MKISVAFLMITICLHASANIGSSQGDGNSSQVDGSTSQAPDSCVSNLNLSVPLLFDTTNLNCLPVWNAQGYILRYSQTSPNIWSFILSAPNTNSYIAMGFSPNGGMVGSSAIVGWISSNGAGGGMKQYYLTGLSPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLQTNQPLSRLIYAFGPNGVFPSPPSFALTQHQDKVSVTLNYATG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00160 210 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 6 210 - -
Vimu9g00160 210 CDD DOMON_DOH 69 202 IPR045266 -
Vimu9g00160 210 Gene3D Cellobiose dehydrogenase, cytochrome domain 66 210 - -
Vimu9g00160 210 SMART DOMON_3 95 181 IPR005018 -
Vimu9g00160 210 ProSiteProfiles DOMON domain profile. 69 181 IPR005018 -
Vimu9g00160 210 SUPERFAMILY CBD9-like 78 207 - -
Vimu9g00160 210 Pfam DOMON domain 84 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00160 Vimu-Chr9 1879573 1880402 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00160 - - vum:124839784 388.652