Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00138 TTGTTGTTGTTTCCGAGAAGCCAAACACTTCCTTTTGGACCTCTACGTGAAAGTTCTATCTTAATAAGTAACCAAGGATTCTGCTGCTGCTTCTTGTTTGGTTATGGTGCTTGGTTAGTGGCCCTGTGTGTGTTTGTGTATTATCTCTCAGCTTCAGCAATGGAGGACTCGGCCAAGTTGCGTTTGGGGAAGTGCCCCAAGTGTCAAAAGGTTATTCCCGAGCTTGCCAATTACACTGTTTATCAATGTGGTGGTTGTGGTAGTGTTCTTCGAGGAAAGCTTAAAAGTTCTGAAGGTGTTAGGTTGTGGGAAACCTCAGATGAGGGACAAGGTGGAGGAGATCAAGGTAGATCAGAAAGTTTCTTGGGTAAAGGGGTAGTTGATTTGAGTGATGATTCAGATGTTGATATTGGGTCCAATGGTGGTTTCTCAATGGAGGGTCAAAGAAGGGATTTGGGAAAACCAAATAAAGGACATGGGAGGTTTTTGGATGGTTCCATGGATGGGGATGAGAAAGGAGTTTTGGAGAATGATTTTGTGAGTAAGGACAAAAGGGGTAAATCAATTGGAAGAGATCAGCAGGAGCAGAAGTCTCACATGGTAGGGGACCAATTCTATGGGAGAGTGTCTAATTGGCCTTATGGGGAGAGAGGTGAGATGCAGGGGTTTCGGAGAAAGTCTCAAGCTGATATGGAGGGTGTCAGATTTCCCACTCATAGTTATCCTGATGAAGGATCTTCAAACAGCTATTCCAGTTTTTCTTACAATTATGGAGAACAGTGGAGGAATTTCAAGGACATGGATGGTGTGAATAAAGTTCAGCATCTTGAACAAGATAGAGCCGATATTCTAAGGAAGCTGGATGAGTTAACCAGCCAATTGAACAAGTCTTCTGAGGTGGTTGGTAACCCCAAAGAAAAGGTTCTTCCTGATGGAAGAATGGTTCCTCCAGATCCTTTCAGTGGCCCTGAAACTTGGTTTCCTGAAGGATATGGATCATCATCAGCTATGAGCAGAACCGCAAGACCATTCTTTGACCCTAATAAACATTTGTCAGGTCCCCCTTATTTCAATTATCATCATGACCCATATCCTTATGCAGCAGGTCCTGAAATGGCTACGCGCAACTTTCACCCTTCCATGCATAACCCAAATTATGCTCCGGGATATGGGGATCCTTTTGTATCCCCAATGATGAGAGATTCACATCCTTTACCCCACAAGTTCCCACAAAAACCAATTCATCCCTACTTTCCTGGACGCTATGCCGATACTGGTCCAGATTCATATGATCCATATGCTCGTAGTGCCATGCTTCACCCACCTTCTTGCTCTTGTTTGCGTTGCTATAACAACAAAAGAAGAGAATCAGTGCCTGTGCCACCTGCTGAATTTGTTAACAGCAGATTCCCTCACACCCCTGCCCCAAATGATCCTATGTTGTACGGTCATGAGATCCCAGGAGCAGTTGGTCCTTATGTTCAGAATTCTAGAGCTGCCATTCCTCCCACTGGTTTACATGAAAGACAACCTCGTACAAGATGGCCTAGAGATTACAATTCTGAGATGGGTAGGTTTGTTGGAAGCCATACTCGAAAAGTAGTGCCTTTGAGTAGTACTCGGCAATGCCTTCCTATAGCTGGTGCTTCTCCTTTCATCACTTGTCATAGTTGCTTTGAGTTACTGCAACTGCCTAAAAAGACACTGGTCATGGTTAAAAATCTTAAGCAGAAGAAAATTAGATGTGGAGCTTGTTCTTCTGAAATGAAACTTGCTGTCGTCAATAAGAAGCTAGTAATTTCTCCTCATTCTGAGATGGAGGAAGCTACCAGATCCACAAGGGTTGATGATGCCATTGGTGAGGTTGTGAAGAGTCGTGTATTCCATTCCCGTGGTGATGTGAACACGAATGCTGTGAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCTGTAGATAGAGAATCTTCTGTGCTGGCTGAAGACTCAACCTTAAAGTCGCGAGAGAGGCACAGTTTCCATTCTTCATCTCCCAGTATTTCTGATGATGAAAATATTCCAGAAATTATGACTGCACCAGGTGGGTTCATTCATCAGCCATCTAAAGCCTCTCCATCTCCTTCACCTGGTAGTTCATTTGACGACCATGTGGTTAATCGATTAGGGAAAGGCAACCAAAGTAGTCGCTCAGATCAAGATCTGGAAAAAGTAGAAAAGAATGCCTCAAGGCAAAATTCTTTGAAAGAAGTAGTGCTTGCAACTGAGATGGATGTTATTGATTATTCTAACACTGGGGTCTCCCAGGATTCTGGTGATGCAAGCAGAGAACATGATCATCCTAGGTCTAACAAAAGGAGTGATTCATTTTTAGCAAACATTATTAAGAAAGATAATGGGAAAAGTAATGTTACTATAAATGGACAGCCAATACCAGATCGAGTGATTAAAAAGGCTGAAAAGTTTGCTGGACCAATCCAGCCAGGAAATTACTGGTATGATTCTCAGGCTGGATTTTGGGGTGTCATGGGGGGACCATGTCTTGGAATAATTCTGCCATTCATAGAAGAGTTCCAGCATCCCATGCCAGAAAAATGTGCTGGTGGAAATACTGGTGTTTTTGTAAATGGTAGAGAACTTCACCAAAAAGATTTAGAATTGCTTTGTCGTAGAGGACTCCCCCGCGATGGCAATAGGTCTTACATCGTTGACATTTCTGGGAGGGTACGAGATGAAAACACAGGGGAAGAGTTGGACAGCCTTGGTAAACTTGCACCAACGTAA 2787 0.432 MLLFPRSQTLPFGPLRESSILISNQGFCCCFLFGYGAWLVALCVFVYYLSASAMEDSAKLRLGKCPKCQKVIPELANYTVYQCGGCGSVLRGKLKSSEGVRLWETSDEGQGGGDQGRSESFLGKGVVDLSDDSDVDIGSNGGFSMEGQRRDLGKPNKGHGRFLDGSMDGDEKGVLENDFVSKDKRGKSIGRDQQEQKSHMVGDQFYGRVSNWPYGERGEMQGFRRKSQADMEGVRFPTHSYPDEGSSNSYSSFSYNYGEQWRNFKDMDGVNKVQHLEQDRADILRKLDELTSQLNKSSEVVGNPKEKVLPDGRMVPPDPFSGPETWFPEGYGSSSAMSRTARPFFDPNKHLSGPPYFNYHHDPYPYAAGPEMATRNFHPSMHNPNYAPGYGDPFVSPMMRDSHPLPHKFPQKPIHPYFPGRYADTGPDSYDPYARSAMLHPPSCSCLRCYNNKRRESVPVPPAEFVNSRFPHTPAPNDPMLYGHEIPGAVGPYVQNSRAAIPPTGLHERQPRTRWPRDYNSEMGRFVGSHTRKVVPLSSTRQCLPIAGASPFITCHSCFELLQLPKKTLVMVKNLKQKKIRCGACSSEMKLAVVNKKLVISPHSEMEEATRSTRVDDAIGEVVKSRVFHSRGDVNTNAVNFSSDDYSGYDFHSVDRESSVLAEDSTLKSRERHSFHSSSPSISDDENIPEIMTAPGGFIHQPSKASPSPSPGSSFDDHVVNRLGKGNQSSRSDQDLEKVEKNASRQNSLKEVVLATEMDVIDYSNTGVSQDSGDASREHDHPRSNKRSDSFLANIIKKDNGKSNVTINGQPIPDRVIKKAEKFAGPIQPGNYWYDSQAGFWGVMGGPCLGIILPFIEEFQHPMPEKCAGGNTGVFVNGRELHQKDLELLCRRGLPRDGNRSYIVDISGRVRDENTGEELDSLGKLAPT 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00138 928 MobiDBLite consensus disorder prediction 132 157 - -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 731 745 - -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 662 746 - -
Vimu9g00138 928 Pfam Probable zinc-ribbon domain 547 592 IPR021480 -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 773 787 - -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 295 317 - -
Vimu9g00138 928 Coils Coil 273 293 - -
Vimu9g00138 928 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 54 894 IPR040244 GO:1900150
Vimu9g00138 928 MobiDBLite consensus disorder prediction 183 204 - -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 662 679 - -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 764 789 - -
Vimu9g00138 928 MobiDBLite consensus disorder prediction 183 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00138 Vimu-Chr9 1606534 1609924 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00138 - - gmx:100798240 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00138 9 1606534 1609924 Vimu9g00138 9 1606534 1609924 ECH
Vimu2g01574 2 11055819 11056560 Vimu9g00138 9 1606534 1609924 PCT