Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00120 ATGGGATACTTATCACAACCATCAGAACATTCAAACATGAAACCAATCTCACTTGCAAAGATGGACGACAATGAAGAATTATGTTCTTATGCTTCCTGGCTAGAAAAGCATCCTTCTGTCTTGGAGAATTTTGATAAAGTGATGAGCGTTGCTGAAGGGAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACACTCTCACCGATTGTAGATGACCCTGATAAAGCTTACATGAGTGATGCTGTAAGTGCTTTGCGTAGGACAATCAGCACCACAAGAAAAAACTGTGGTGGCTTTTTGAGTCCTGACGAGTTCTGTAGTTTTGGTTTTTCTCTGTTGCTTTCATTTTCTCATAAACTTAGTTGTCAATGCGGTATGGTTTGCAATTTGCAGATGCGTGCAGCTGTACGTGAAGTTGCTTATTGTTTTCCCACAGCCATTGTTAGTGGAAGGTGTAAGGATAAGGTGTATGAATTTGTGAAGTTAAGGAATGTTTACTATGCTGGAAGTCATGGTATGGATATATCAACTCCATCAGGGTCTTCAAAATGTGAAGATCAGAAGCATCAGATAAAGGGTGTTGATGAAAAGGGTAATCATGTTGTTCACTTTCATCCCGCAAAAGAATTTTTGCCAACCATTCAAGAGATAATTAAGGTTTTGAAAGAAAACACAAGAAGAATAAAGGGCTCTATGATTGAGGATAACATGTTCTGTGTCACTGTACACTACCGGTGTGTGAAAAATGAAGAGGATATTAGTGTTCTGAGAGAAATGGTGGAGTCCACAATGAAATCTTACCCCAGTTTCCACATATCAAGTGGAAGAAAGGTTATGGAAATACGTCCGAATGTAAACTGGGACAAAGGGTGTGCTCTTATGTATTTGCTTGACACTCTTGGCTATGACAACTTCAACAATGTTCTTCCTATCTACCTCGGTGATGATAGAACTGATGAAGATGCTTTTAAGGTTATAAGACACATTGGACAAGGTTTTCCCATTGTTGTTTCTTCAATTGCAAAGAAGACTCAAGCTTCATATTCCTTGCGTGATCCTTCTGATGTGCTGGCTTTCTTGATTCGTTTAGCAAGATGGAAGAAGAATATGTTATAA 1116 0.3871 MGYLSQPSEHSNMKPISLAKMDDNEELCSYASWLEKHPSVLENFDKVMSVAEGKEIVVFLDYDGTLSPIVDDPDKAYMSDAVSALRRTISTTRKNCGGFLSPDEFCSFGFSLLLSFSHKLSCQCGMVCNLQMRAAVREVAYCFPTAIVSGRCKDKVYEFVKLRNVYYAGSHGMDISTPSGSSKCEDQKHQIKGVDEKGNHVVHFHPAKEFLPTIQEIIKVLKENTRRIKGSMIEDNMFCVTVHYRCVKNEEDISVLREMVESTMKSYPSFHISSGRKVMEIRPNVNWDKGCALMYLLDTLGYDNFNNVLPIYLGDDRTDEDAFKVIRHIGQGFPIVVSSIAKKTQASYSLRDPSDVLAFLIRLARWKKNML 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00120 371 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 19 369 IPR044651 GO:0004805|GO:0005992
Vimu9g00120 371 Gene3D - 56 97 IPR023214 -
Vimu9g00120 371 Gene3D - 123 196 IPR023214 -
Vimu9g00120 371 Gene3D - 204 370 IPR023214 -
Vimu9g00120 371 SUPERFAMILY HAD-like 57 369 IPR036412 -
Vimu9g00120 371 Pfam Trehalose-phosphatase 129 354 IPR003337 GO:0003824|GO:0005992
Vimu9g00120 371 NCBIfam trehalose-phosphatase 131 364 IPR003337 GO:0003824|GO:0005992
Vimu9g00120 371 FunFam Trehalose 6-phosphate phosphatase 207 284 - -
Vimu9g00120 371 FunFam Trehalose 6-phosphate phosphatase 213 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00120 Vimu-Chr9 1416121 1421969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00120 K01087 - gmx:100799466 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00120 9 1416121 1421969 Vimu9g00120 9 1416121 1421969 ECH