Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00112 TTGATGTTGACGATGATAATCGTTGCGCTCATCACGGTCATACTTTTTGGATTCTGCATTGCTCCAGTCAACGGCAGGAGGCGGAGGAACAGAGCCGTCGGATTCTTCCATCCGTATACTAACGACGGCGGCGGCGGGGAGAGGGTGCTCTGGTGTGCCGTCAGAGGCATCCAAGAGGAGATCCCTGACCTTGACTGCTGTATCTACACCGGAGATCATGACGCCACCCCTCAGTCGCTGATGGCTCGAGCCCTAGATCGCTTTGGGGTCACGCTCCTCTCCCCTCCAAAGGTGGTTCATTTGTACAAGAGAAAGTGGATCGAAGAGACCACTTATCCGCACTTCACAATGATTGGTCAAAGTCTGGGTTCTATGTATCTTGCTTGGGAGGCTTTGTGCAAGTTTACTCCTGTATATTACTTTGACACAAGTGGATATGCTTTTACATATCCACTTGCCCGGTTGTTTGGATGTAAAGTTATTTGCTATACACATTATCCCACTATCAGTTCAGACATGCTATCTCGTGTTCGTGATCGCAGCCTGATGTATAATAATGATGCCTTAATTACCAAAAGTGTTTGGCTTTCAAGATGCAAAATAGTCTATTATACATTCTTCAGCTGCTTGTATGGGATTGTAGGATCATGTGCACACCTGGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAGTCTTTGGAAAGTTCCAGATCGTATTAAGCGAGTATATCCTCCTTGTGATACTTCAGGACTCCAGCTTTCCCATATTGCTTGTTACTTTGTGGCATTGAAGTCTCTTACGGTCTGTTTCTTCTATGTTTCCTCCCGGTGTAGTAAGCAATATAAACAGGTACTTCCCTTGGAACGATCAACAGAAGTTCCTGTAATAATATCTGTTGCGCAATTTCGACCGGAGAAGGCACACACTCTCCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTAGATCCTTCCTTACCAAAACCTAAGTTCCAAATTGTAGGTAGCTGTAGAAATAAGTCAGATGATGACAGACTTCAAATGTTAAAAAAGAAAGCAATTGAGCTGAATATTAGTGAACAAGTGGAATTTCACAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGGATTCATTCAATGACAGATGAGCATTTTGGCATTAGTGTTGTAGAATACATGGCTGCCGGTGCTATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTGCTAGATGAAGATGGTCAACAAACAGGATTTCTTGCCTGCACTGTTGAAGAATATGCAGACGCCATTGTGAGGACAGTAACAATGTCGGAGACAGAGAGACTTAAGGTGGCTGCAGCTGCAAGGAGAAGGGCAAGGAGATTTTCTGAGCACAGGTTTTATGATGACTTCAAAGCTGCAGTGCGTCCTATCCTGTGTCCTGTTTCTAGGTGA 1476 0.4431 MMLTMIIVALITVILFGFCIAPVNGRRRRNRAVGFFHPYTNDGGGGERVLWCAVRGIQEEIPDLDCCIYTGDHDATPQSLMARALDRFGVTLLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSMYLAWEALCKFTPVYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLSRVRDRSLMYNNDALITKSVWLSRCKIVYYTFFSCLYGIVGSCAHLAMVNSSWTKSHIESLWKVPDRIKRVYPPCDTSGLQLSHIACYFVALKSLTVCFFYVSSRCSKQYKQVLPLERSTEVPVIISVAQFRPEKAHTLQLEAFSAAIKRLDPSLPKPKFQIVGSCRNKSDDDRLQMLKKKAIELNISEQVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADAIVRTVTMSETERLKVAAAARRRARRFSEHRFYDDFKAAVRPILCPVSR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00112 491 Pfam Glycosyl transferases group 1 294 453 IPR001296 GO:0016757
Vimu9g00112 491 Pfam ALG11 mannosyltransferase N-terminus 31 236 IPR031814 -
Vimu9g00112 491 Gene3D Glycogen Phosphorylase B; 275 469 - -
Vimu9g00112 491 FunFam GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase 288 469 - -
Vimu9g00112 491 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 34 482 - -
Vimu9g00112 491 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 24 487 IPR038013 GO:0004377
Vimu9g00112 491 CDD GT4_ALG11-like 31 477 IPR038013 GO:0004377
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00112 300 474 Glycosyltransferase AT1G78800 27.528 1.13e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00112 K03844 - gmx:100808662 811.216