Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00094 ATGGAGAATCTGATACAGTTGGTGAACAAAATCCAGAGAGCGTGCACTGCACTCGGTGATCACGGCGAGGAAAGCGCCATGCCTACTCTCTGGGACGCCCTTCCGTCCATCGCCGTCGTCGGAGGACAGAGCTCTGGAAAATCTTCAGTGTTAGAGAGTATTGTCGGAAAGGACTTTCTACCACGTGGATCTGGAATTGTTACTCGGCGTCCTCTTGTTTTGCAACTTCACAAGATTGATGAAGGAAGAGAATATGCTGAATTTATGCACCTTCCAAGGAAGAAATTTACTGATTTTGCTGCTGTTAGGCAGGAGATTGCTGACGAGACCGATAGAGAAACAGGACGCAACAAGGGTATTTCGTCTGTGCCCATCCATCTGAGTATCTACTCCCCTCATGGTGAGATACAAATATTAGCAGAGATTTTTATCCATAGTGAAGATTTAATGAAAAACTGTGCAACTAGATTGTCTTTGGAGGAGGATGATCAGGAGCACGGCGCTGGCTGCGCGGGCCTCTCCAGGAGATGGGAGGCAGTTCTGGCGGGTCTGTGCCACCAAACTAATTCTTCTCGGACACCAATGACGGGTGTCCAGTGGGCAGTTTCAGCGCAGGAACTCATTTCATGCATTGAATTTGTTCGCTTGACAGTTGTGAATCTGACGCTGGTTGATCTTCCGGGACTTACTAAAGTCGCTGTTGAGGGTCAGCCAGATAGCATAGTGCAAGACATTGAAAATATGGTTCGGGCTTTTATTGAAAAGCCGAATTGCATCATCTTGGCAATATCTCCTGCCAATCAAGACCTTGCAACCTCAGATGCAATTAAGATTTCCCGTGAAGTAGATCCTAAAGCTGAAGCTGAAAGCAAAAATGACGTTCAAAATAAAAACCCAGACGGTGAATTCAATTTTGTTGAAACCAAATTAACTGACAGGGATTTTATGAAGATATTCTCCAGAAATATCTTTGGGGAAAGGACATTCGGTGTTTTGACAAAGATTGATCTTATGGATAAGGGTACTGATGCGTCGGAGATCCTTGAAGGGAAAGCATATAAGCTAAACTTCCCTTGGATTGGTGTTGTTAACCGCTCCCAAGCTGATATCAATAAACAAGTTGATATGATTGCTGCTCGGAAAAGAGAAAACGAGTATTTTGCTACTACCCCAGAATATAGACATCTTGCTTCCAGAATGGGCTCTGTGCATCTAGGAAAGGTGCTGTCGAAGCATTTGGAAACTGTTATCAAGTCTCGGATACCAGGCCTACAGTCACTCATTAACAAGACTATCATTGAATTGGAGACAGAATTGAACCGTATTGGCAAACCTATTGCTGCTGATACTGGAGGGAAGCTGTACATGATAATGGAAATCTGTCGAACTTTTGATCAGATATTTAAAGATCATCTTGATGGCATACGTCCTGGTGGAGAGAAAATTTACCAAGTATTTGATAATCAATTTCCAGCATCTTTAAAACGGCTGCAGTTTGACAAACATTTATCAATGGACAATGTGCGGAAACTAATAACTGAAGCAGATGGTTATCAACCTCATCTCATAGCTCCAGAGCAAGGATACCGACGCCTTATCGAATCTTGCTTGGTATTAGTTAGGGGGCCCGCTGAAGCAGCTGTTGATGCGGTTCACGGAATTTTGAAGGATTTGATTCATAAATCTATGAGTGAGACAATGGAATTAAAGCAGTATCCCACCTTGAAGGTAGAACTCGGAAGTGCAGCTGTTGATTCATTGGAGAGGATGAGAGAAGAAAGTAAGAGAGCAACTCTGCTTTTGGTGGACATGGAGTATGGCTATTTGACTGTTGAATTTTTCCGCAAACTTCCCCAAGACGCAGAAAAGGGTGGAAATCCAAGTCATTCACTTTTCGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACTACCGTGTTGTCCTATGTGAACATGGTATGTGGGACCCTGAGGAACACCATTCCCAAGTCCGTAGTTTATTGTCAAGTGCGTGAGGCTAAGCGCAGCTTACTGGATCATTTCTTTACAGAATTGGGGAAAAGGGAGGGAAAACAATTAGCTTCACTTCTAAATGAGGACCCAGCAATCATGCAGCGCCGTACCTCCCTGGCAAAGAGGCTAGAACTATACAGAAGTGCACAATCAGAAATTGAGGCTGTTGCATGGGAAAGGTAG 2199 0.4375 MENLIQLVNKIQRACTALGDHGEESAMPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKIDEGREYAEFMHLPRKKFTDFAAVRQEIADETDRETGRNKGISSVPIHLSIYSPHGEIQILAEIFIHSEDLMKNCATRLSLEEDDQEHGAGCAGLSRRWEAVLAGLCHQTNSSRTPMTGVQWAVSAQELISCIEFVRLTVVNLTLVDLPGLTKVAVEGQPDSIVQDIENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKAEAESKNDVQNKNPDGEFNFVETKLTDRDFMKIFSRNIFGERTFGVLTKIDLMDKGTDASEILEGKAYKLNFPWIGVVNRSQADINKQVDMIAARKRENEYFATTPEYRHLASRMGSVHLGKVLSKHLETVIKSRIPGLQSLINKTIIELETELNRIGKPIAADTGGKLYMIMEICRTFDQIFKDHLDGIRPGGEKIYQVFDNQFPASLKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVLVRGPAEAAVDAVHGILKDLIHKSMSETMELKQYPTLKVELGSAAVDSLERMREESKRATLLLVDMEYGYLTVEFFRKLPQDAEKGGNPSHSLFDRYNDAYLRRIATTVLSYVNMVCGTLRNTIPKSVVYCQVREAKRSLLDHFFTELGKREGKQLASLLNEDPAIMQRRTSLAKRLELYRSAQSEIEAVAWER 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00094 732 Gene3D - 139 431 IPR027417 -
Vimu9g00094 732 PANTHER DYNAMIN 325 728 IPR022812 -
Vimu9g00094 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 138 IPR027417 -
Vimu9g00094 732 CDD DLP_1 34 422 IPR001401 GO:0003924|GO:0005525
Vimu9g00094 732 Gene3D Dynamin, middle domain 453 708 - -
Vimu9g00094 732 ProSiteProfiles GED domain profile. 640 732 IPR020850 -
Vimu9g00094 732 FunFam Dynamin-related protein 5A 454 708 - -
Vimu9g00094 732 Gene3D - 1 138 IPR027417 -
Vimu9g00094 732 PRINTS Dynamin signature 34 52 IPR022812 -
Vimu9g00094 732 PRINTS Dynamin signature 59 76 IPR022812 -
Vimu9g00094 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 430 IPR027417 -
Vimu9g00094 732 Pfam Dynamin family 211 286 IPR045063 -
Vimu9g00094 732 Pfam Dynamin family 37 134 IPR045063 -
Vimu9g00094 732 SMART dynamin_3 1 373 IPR001401 GO:0003924|GO:0005525
Vimu9g00094 732 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 133 IPR030381 GO:0005525
Vimu9g00094 732 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Vimu9g00094 732 SMART GED_2 635 728 IPR003130 GO:0003924|GO:0005525
Vimu9g00094 732 Pfam Dynamin central region 343 610 IPR000375 -
Vimu9g00094 732 Pfam Dynamin GTPase effector domain 636 728 IPR003130 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00094 Vimu-Chr9 1134152 1145410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00094 - - gmx:100793097 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00094 9 1134152 1145410 Vimu9g00094 9 1134152 1145410 ECH