Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00077 ATGGTATCATTGTGCCTCAAAGTCTATGAACAACGTATTCAGCTGATAGCAGAAAGTATATGCAGAGTTGTGGCTTCTACTTCTACTCCCTACCCCCAAATGTCCAACTTAATCACCTTGTTTATGCGGTGGTTGTGTCTGCTATCTGCTATCTACAATGCGAAGCATATAGCACATGGAAGTACTATGGGAGAATCAACCAGGTTCTATGATTTCAAGGTTCAAACCAAAAGAGATACCAAACTTTGCAACTCCAAAGACATTGTCACAATTAATGGTATGTTTCCAGGACCTGTTATTTACGCTCAAGAGGATGATAGAGTCATAGTAAAAGTGACCAACAAGACACCTTCCAATGTTACAATTCACTGGCATGGTGTTCGGCAAAGGCTATCATGCTGGTATGATGGGCCATCCTTGATTACACAATGTCCAATTCAATCAGGCCAGAGCTTCACTTATAACTTTTCAGTGGTGCAGCAGAAGGGCACCTTCTTCTGGCATGCTCATGTTTCTTGGTTAAGAGGAACAGTTCATGGTGCCATGATTGTTTATCCAAAGGCTGGGGTACCTTACCCGTTTAAGTTTCCCGATGAAGAGCACATAATTATACTAGGGGAATATTGGCTGCAGGATCTCCAACAAATTGAGAAGGCCACTCTAGCAAGTGGAGGACCTCCTCCGAAAGCAGATGCATATACCATTAACGGTCATCCAGGACCCAACTACAACTGCTCTACTAATGATGTCTACCAAATTGACGTGATTCCGGGGAAGACCTATTTGTTAAGATTGATTAATGCAGGTCTGAACACTGAGAACTTCTTCACCATCGCTAATCACAATTTAACAATCGTGGAAGCTGATGCTGAATACACCAAGCCATTCACCACAGACTCAGTGATGATTGGACCAGGTCAAACATTGAGTGTCCTAATCTCTGCAAATCAACCAGTAGGAAAATACTCCATGGCTGTAGCACCTTATGAGTCTGGAAAGATTGTCATATATCAAAACGTTTCAGCTATAGCAGGCTTCAACTACATAGGAGCTCCATCTGACAGCCTATCTTTACCTGCTAAATTGCCTAAACTTGATGATGAAGTGGCTGTTAAGACAGTTATGGACGGATTAAGGAGCCTAAATCAAGTCAATGTTTTCAAAGAAATCGATAAACATCTATTCATTACCATTGGTTTGAATGTTCAAAAGTGTCACTCGAAGACACCAAAGCAAAACTGCCAAGGCATGCACAATGGGGTGCTGGCAGCTTCAATGAACAATATAAGTTTCGTTAATCCCAACATTTCAATCTTGGAAGCATATTATAAGAAAATAAAAGGAACATACACTGAAGATTTCCCAGACACACCCCCAAAATTCTATGACTTTGTCAATGGTGCCCCTAATACCATTCCATATGACACACAGTCATTGAATGGTACTAGAATAAAGGTCCTTAAATATGGTAGTAGGGTGCAACTCATTCTGCAGGACACGGGGATAGTCAACACTGAAAACCACCCAATGCACTTCCATGGCCACAGCTTTTATGTGGTAGGGTATGGCAAGGGTAACTATAACCCAATAACTGCACAATTCAATTTAGTGGATCCTCCATACATGAACACAATTGGAGTTCCAACAGGAGGATGGGCAGCAATTCGCTTTGTTGCTGATAATCCAGGGGTGTGGTTTTTGCACTGCCACATTGATATACACAAGTCATGGGGACTGGGAATGGTATTTATAGTTAACAATGGACAAGGAGAGCTGGAATCCTTACCACACCCTCCGCCAGACTTGCCACAGTGTTAA 1818 0.4202 MVSLCLKVYEQRIQLIAESICRVVASTSTPYPQMSNLITLFMRWLCLLSAIYNAKHIAHGSTMGESTRFYDFKVQTKRDTKLCNSKDIVTINGMFPGPVIYAQEDDRVIVKVTNKTPSNVTIHWHGVRQRLSCWYDGPSLITQCPIQSGQSFTYNFSVVQQKGTFFWHAHVSWLRGTVHGAMIVYPKAGVPYPFKFPDEEHIIILGEYWLQDLQQIEKATLASGGPPPKADAYTINGHPGPNYNCSTNDVYQIDVIPGKTYLLRLINAGLNTENFFTIANHNLTIVEADAEYTKPFTTDSVMIGPGQTLSVLISANQPVGKYSMAVAPYESGKIVIYQNVSAIAGFNYIGAPSDSLSLPAKLPKLDDEVAVKTVMDGLRSLNQVNVFKEIDKHLFITIGLNVQKCHSKTPKQNCQGMHNGVLAASMNNISFVNPNISILEAYYKKIKGTYTEDFPDTPPKFYDFVNGAPNTIPYDTQSLNGTRIKVLKYGSRVQLILQDTGIVNTENHPMHFHGHSFYVVGYGKGNYNPITAQFNLVDPPYMNTIGVPTGGWAAIRFVADNPGVWFLHCHIDIHKSWGLGMVFIVNNGQGELESLPHPPPDLPQC 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00077 605 SUPERFAMILY Cupredoxins 388 605 IPR008972 -
Vimu9g00077 605 Pfam Multicopper oxidase 199 350 IPR001117 -
Vimu9g00077 605 CDD CuRO_3_LCC_plant 450 588 IPR034289 GO:0005507
Vimu9g00077 605 ProSitePatterns Multicopper oxidases signature 1. 563 583 IPR033138 -
Vimu9g00077 605 SUPERFAMILY Cupredoxins 62 209 IPR008972 -
Vimu9g00077 605 Pfam Multicopper oxidase 455 588 IPR011706 GO:0005507|GO:0016491
Vimu9g00077 605 CDD CuRO_1_LCC_plant 70 186 IPR034288 GO:0005507
Vimu9g00077 605 SUPERFAMILY Cupredoxins 197 344 IPR008972 -
Vimu9g00077 605 PANTHER MULTI-COPPER OXIDASE 65 590 IPR045087 -
Vimu9g00077 605 Gene3D - 197 383 IPR008972 -
Vimu9g00077 605 CDD CuRO_2_LCC_plant 201 348 IPR034285 -
Vimu9g00077 605 Pfam Multicopper oxidase 74 188 IPR011707 GO:0005507
Vimu9g00077 605 Gene3D - 45 186 IPR008972 -
Vimu9g00077 605 Gene3D - 403 605 IPR008972 -
Vimu9g00077 605 ProSitePatterns Multicopper oxidases signature 2. 568 579 IPR002355 GO:0005507
Vimu9g00077 605 NCBIfam laccase 67 605 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00077 Vimu-Chr9 948737 953481 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00077 K05909 - gmx:100803876 1071.23