Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00069 ATGGAAAGCAAGCAACAGAGCATGAAGCAAAGCAGCAGCATGGAGACAGAGACAGAGACAGAAACAGAGTTTGAGGATTTGCTACCAGTTATGGCAGAGAAGCTTGATGTGGAGTCCTTCGTTTCAGAACTGTGTGGAGGTTTCAAGCTTCTATCAGACCCAGAAACAGGTTTGATAACAAGTGAGAGTCTGAGGAGAAATTCAGCTCTTCTTGGCATGGAGGGCATGACCATGGAGGATGCAGATGCCATGGTTAGACAAGGAGATCTTGATGGAGATGGAAAGCTTAATCAAACTGAATTTTGCATTCTCATGATCAGGCTCAGCCCTGGAATCATGGAACATGCTGAGGCATGGCTGGAAAAGGCAATTCATCAAGAACTCAGCAAGTCCTCAGCTTAG 402 0.4577 MESKQQSMKQSSSMETETETETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRRNSALLGMEGMTMEDADAMVRQGDLDGDGKLNQTEFCILMIRLSPGIMEHAEAWLEKAIHQELSKSSA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00069 133 Pfam EF-hand domain pair 55 105 IPR002048 GO:0005509
Vimu9g00069 133 ProSitePatterns EF-hand calcium-binding domain. 89 101 IPR018247 -
Vimu9g00069 133 MobiDBLite consensus disorder prediction 1 17 - -
Vimu9g00069 133 Gene3D - 21 133 - -
Vimu9g00069 133 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Vimu9g00069 133 MobiDBLite consensus disorder prediction 1 23 - -
Vimu9g00069 133 PANTHER CALCIUM-BINDING PROTEIN KIC 21 130 IPR044205 GO:0005509
Vimu9g00069 133 SUPERFAMILY EF-hand 38 115 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00069 Vimu-Chr9 816622 817023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00069 1 132 EF-hand Containing Proteins AT2G46600 64.394 6.14e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00069 K24345 - gmx:100801586 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00069 9 816622 817023 Vimu9g00069 9 816622 817023 ECH