Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02714 ATGAAGCATCATCATAGGTCACCACACCACCAACAGCTCTTCTGGGCGAAGGTGGTCATGCGTAAGTGGCTTAACATGGGGAGTTACGAGTCTGATTACAGTGCTGACCCTGATGATGACGATGAAGATTCTGAGAGTGCTTCAGACAACGAAGAATGGGGAGGACAGTCGCGGTTTGCAGACAACAGAGGTTATGACGATGAAACTCCATCTGAATCTACAGAATTTCTTCCCAAGTTAAGGAGGCAAAAGTCATCAACTTTTAGATCTCAGTATATAAACCAAAAGGAGTTGAAGATATGTGTTGGGACATGGAATGTTGGAGGAAAACTTCCACCTGATGACCTTGTTATTGATGATTGGCTTGGTGTCAATGAACCAGCTGACATCTATGTACTTGGTCTTCAAGAGATTGTACCCTTAAACCCTGGTAATATTTTTGGTGCTGAAGATACTAGTCCTGTTCCAAAATGGGAGAATATTATTCGAGAAACACTGAATAGAGTTCGACCTGAAATACCAAAGATAAAGTCCTTTAGTGACCCTCCCTCTCCATCAAAATTTAAGCCATCAGATGATGTGCCTGATATAGAAGAAGAAATATTGCTTGAAAGTGATAGTGACATTGGTGAGGAAGTCCATCCTTTGGACGAAGACAACAATTTATGTGGAGGTACTGATGGAACAGCCATGGAAGAAACTGAGACTACAAATTTATTAGCTTCTGATGCTGATGATATTGTAAACTCCAATTTGGCAGTTAAAACTGGTTTACGGCGACAGTTTTCTTTTCCAAAGATGTTTGATAGGCAACAGGGTTTGTCAGAAAACATGGACACGTCATTTTCCCAACAGGCCACTAAACTAACTCGAATGCTTAGTGGGTCTGAAAGGATTGGTTTGAGCTGGCCAGAGCCTCCACTGCATCTGCTATCTCAGAGAGTTTTGGATAGACCAACTTCTTTTAAATCATTGAAATCCTTTAAATCATCTAAGTCGTTCAAAACATATAACTCTTTCAAATCAATTATGGATGAAATTCCAGGGGCAGGATTGATTCCTGAAACTGACCTTGAAGCTTTGATAAAGCGAAAAAGAAGATCTTCATATGTAAGGATTGTTAGCAAGCAAATGGTTGGAATTTTCATCACTGTATGGGTTCGTCGGAGCTTGCGTAAACATATTCAAAATTTAAAGGTTTCAACTGTTGGTGTTGGTGTTATGGGCTATATTGGTAACAAGATAAGATCAAACTTTGTGCATGATATCCTTCTCCCTTTCTCTGCCCTTTTGCTTGCTGATATTGCTCACGGGCTGCTGATCATGTTGTCATGTTTCTGTTTCTCTTATTCTGGATCAATATCTATCAGTATGTCCATACATCAGACGCTCTTTTGTTTCATATGTACCCACCTTACCTCAGGTGAAAAGGAAGGAGACGAACTTAAAAGGAATGCTGATGTTCATGAAATACTTCGTAGAACCCAATTCCATTCTCTTTCTTATATAGGGCTTCCCAAAAGAATCCTTGATCATGAAAGAATAATTTGGTTGGGTGATCTGAATTATCGTATCAACTTATCAAATTTGGAAACAAAAGCTCTTATCTCAAAAAAGCAGTGGTCAAAATTAGTTGAGAAAGACCAGCTCATGCGAGAACTCAAGAACGGTGTGTTTGGAGGATGGTCGGAAGGCATATTAAACTTTCCACCAACTTACAAGTATGAGGTTAATTCAGATAAATACTACGGAGAGGATCCCAAAGTTGGAAAGCGCTCACCTGCATGGTGTGATCGTATTCTATCATATGGCAAGGGAATGAAGTTGTTGAGTTACAGAAGGGCAGAGCTCAAACTGTCCGATCACAGACCTGTGACAGCCACATACATGGTTGAGGTTGAAACGTTCTCTCCTAGGAAGCTACAGCGAGCTCTAACTTTCACTGATGCAGAGATAGAAAATGAACAAGTCATAACAAATTTGAGTAATTGGAATTTAGCTGCTTAA 2007 0.4001 MKHHHRSPHHQQLFWAKVVMRKWLNMGSYESDYSADPDDDDEDSESASDNEEWGGQSRFADNRGYDDETPSESTEFLPKLRRQKSSTFRSQYINQKELKICVGTWNVGGKLPPDDLVIDDWLGVNEPADIYVLGLQEIVPLNPGNIFGAEDTSPVPKWENIIRETLNRVRPEIPKIKSFSDPPSPSKFKPSDDVPDIEEEILLESDSDIGEEVHPLDEDNNLCGGTDGTAMEETETTNLLASDADDIVNSNLAVKTGLRRQFSFPKMFDRQQGLSENMDTSFSQQATKLTRMLSGSERIGLSWPEPPLHLLSQRVLDRPTSFKSLKSFKSSKSFKTYNSFKSIMDEIPGAGLIPETDLEALIKRKRRSSYVRIVSKQMVGIFITVWVRRSLRKHIQNLKVSTVGVGVMGYIGNKIRSNFVHDILLPFSALLLADIAHGLLIMLSCFCFSYSGSISISMSIHQTLFCFICTHLTSGEKEGDELKRNADVHEILRRTQFHSLSYIGLPKRILDHERIIWLGDLNYRINLSNLETKALISKKQWSKLVEKDQLMRELKNGVFGGWSEGILNFPPTYKYEVNSDKYYGEDPKVGKRSPAWCDRILSYGKGMKLLSYRRAELKLSDHRPVTATYMVEVETFSPRKLQRALTFTDAEIENEQVITNLSNWNLAA 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02714 668 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 19 652 IPR045849 GO:0004445
Vimu8g02714 668 SMART i5p_5 272 637 IPR000300 GO:0016791|GO:0046856
Vimu8g02714 668 MobiDBLite consensus disorder prediction 33 49 - -
Vimu8g02714 668 MobiDBLite consensus disorder prediction 61 75 - -
Vimu8g02714 668 MobiDBLite consensus disorder prediction 32 75 - -
Vimu8g02714 668 SUPERFAMILY DNase I-like 81 648 IPR036691 -
Vimu8g02714 668 Gene3D Endonuclease/exonuclease/phosphatase 77 181 IPR036691 -
Vimu8g02714 668 FunFam Type I inositol polyphosphate 5-phosphatase 1 79 182 - -
Vimu8g02714 668 Gene3D Endonuclease/exonuclease/phosphatase 323 661 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02714 Vimu-Chr8 38338541 38344300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02714 368 633 Acyl Lipid Metabolism Gene Families AT1G65580 27.419 8.36e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02714 - - gmx:100811025 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02714 8 38338541 38344300 Vimu8g02714 8 38338541 38344300 ECH