Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02692 ATGTTATTGACAGTCGAAGGTGGAGGATTCTTCTCTTCTTCAGCTTCAGGATATAGTAAGGGTTTGACCCTTCTTCTCTTGGGTCAGAGGAGTGAGGATAAATCCATGAGGGTTTTGCCGTTGAGCCAGTTCCAGTTGGTAGGCCAAGAATCTGACCACGAGCTCCAGCTGGCTTCCAGAAAGAAACGCTTCTCCAGCAGGTGCGCTTCCTTTGTTTGCTTCGGCTGCACCTCTGCAAGGCTTGACACTGCATCTCATCTTAAAGTGGTCCATGCCAAACACCATGATGTCTCTTCAGGGACCCTGGTTTCCAACAAGGGCAAGTATCCTCCTGACAATGTAAATGATGATAATAGGAAGGTTGCACTTAAAAGTAGCTTAAAAGGGCAAGGAAATAAAAAACCAGTTCTTGTCGAGGCTGTTGCTGAACATGAGGCATCAGGTGGACAGGAGAATGATGCTCATGTCCAAACAGAGAGAAGGAAAGTGCAATGGACGGATGCTTGTGGTAGTGAGCTTGTTCAATTACATGAATTTGAGCCCAGGTACTTGAATATTTTATTTTCCCACTGA 573 0.4572 MLLTVEGGGFFSSSASGYSKGLTLLLLGQRSEDKSMRVLPLSQFQLVGQESDHELQLASRKKRFSSRCASFVCFGCTSARLDTASHLKVVHAKHHDVSSGTLVSNKGKYPPDNVNDDNRKVALKSSLKGQGNKKPVLVEAVAEHEASGGQENDAHVQTERRKVQWTDACGSELVQLHEFEPRYLNILFSH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02692 190 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 27 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02692 Vimu-Chr8 37665457 37670440 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02692 - - gmx:100814778 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02692 8 37665457 37670440 Vimu8g02692 8 37665457 37670440 ECH
Vimu8g02692 8 37665457 37670440 Vimu3g02890 3 43039080 43039685 PCT