Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02690 ATGTCTCTGGCATCTTCAATCCCATGCATCAAAATCCCAACTTGTTCCTCTTCTCCATCATCTTCTTCCTCAACTTCATCCTATTCTTTCAGGTTTTCTTCTTCCAAGCCTCACAGTATCACTATAAGGAGCTCTCAGGCTGAAGGGCCTGTGAGAAGGCCAGTGGCACCCCAGATAAGAGAACCATCATCAACAAGTGTTCCTCCTCAGCTTCAGAAGCCTGCACTTCCTTCTCAGACTCCTCCATCACCCCCTTCAGTGGTGCCTCCACCACAGAAGCCTGCTACTGCTGTTGTTGGGGATGGTAAGAATGTCATTACATTAGAGTTTCAGAGGCAAAAGGCTAAGGAGTTGCAGGAATATTTCAAACAGAAGAAGCTTGAAGAAGCAAATCAAGGTCCTTTCTTTGGTTTCATAGGGAAAAATGAGATTAACAATGGAAGATGGGCAATGTTTGGTTTTGCAGTAGGGTTGCTTACAGAGTTTGCAACAGGCTCAGACTTTGTTGATCAAATAAAGATCCTTCTCTCGAATTTTGGGATAGTCGATTTGGAATGA 558 0.4409 MSLASSIPCIKIPTCSSSPSSSSSTSSYSFRFSSSKPHSITIRSSQAEGPVRRPVAPQIREPSSTSVPPQLQKPALPSQTPPSPPSVVPPPQKPATAVVGDGKNVITLEFQRQKAKELQEYFKQKKLEEANQGPFFGFIGKNEINNGRWAMFGFAVGLLTEFATGSDFVDQIKILLSNFGIVDLE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02690 185 PANTHER OS02G0610700 PROTEIN 10 178 - -
Vimu8g02690 185 SUPERFAMILY Chlorophyll a-b binding protein 118 174 - -
Vimu8g02690 185 MobiDBLite consensus disorder prediction 74 92 - -
Vimu8g02690 185 MobiDBLite consensus disorder prediction 59 73 - -
Vimu8g02690 185 Coils Coil 108 128 - -
Vimu8g02690 185 Gene3D Chlorophyll a/b binding protein domain 95 178 - -
Vimu8g02690 185 MobiDBLite consensus disorder prediction 1 46 - -
Vimu8g02690 185 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02690 Vimu-Chr8 37662577 37663822 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02690 - - gmx:100804460 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02690 8 37662577 37663822 Vimu8g02690 8 37662577 37663822 ECH
Vimu8g02690 8 37662577 37663822 Vimu3g02892 3 43046101 43046511 PCT