Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02241 ATGTTAAGCAAAGGTCAAGGAAAGACAATGGGAAGCTATTTTACATTAATTAATGCTTTAGTAAACGATGACCGACTTGATGAAGCTGAAGAGCTTTGGACAAAGTTATTAATGCGGTATATGGAAAGTTTGCCTCGTAGATTTTTTGATAAAATGATATCTATCTACCATAAGAGGGGCATGCATGAGAAGATGTTTGAGATATTTGCAGACATTGAGGAGCTTGCTATGCGACCTAGTGTGTCTATTGTGTCAATGGTTGGAGAAGCCTTTATAGAGCTGGGTATGCTGGACAAATACCATAAGTTACATGCAAAATATCCACCACCAGAATGGGAATATAGATACAGCAGAGGAAGGCGTATAAAAGTCAAAGTGCAAGCTCCATCTAAACAGGTCAACACATACACAGAAAGGCTTGAGAATTTTGAACAAGACTCAGACTTAAACAAGAACTATGAATCTTCAGAAGAGACTTCGGGGATAATTGATGACCTGCAAGTCACACATGATAATGACGTAATAATATACACGGAACCTGAACAAATTTCAGACATTACAGAGAGAATTGATGACGAGCAACTCAGGCAGGAGGCCGATGTAACATCCAATGAACTTGAACAAATTTCAGAAAATTCAAATCACAGTATGGAAACTATTTTAGATGTCTAA 672 0.3765 MLSKGQGKTMGSYFTLINALVNDDRLDEAEELWTKLLMRYMESLPRRFFDKMISIYHKRGMHEKMFEIFADIEELAMRPSVSIVSMVGEAFIELGMLDKYHKLHAKYPPPEWEYRYSRGRRIKVKVQAPSKQVNTYTERLENFEQDSDLNKNYESSEETSGIIDDLQVTHDNDVIIYTEPEQISDITERIDDEQLRQEADVTSNELEQISENSNHSMETILDV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02241 223 MobiDBLite consensus disorder prediction 203 223 - -
Vimu8g02241 223 PANTHER OS01G0757700 PROTEIN 1 159 IPR044646 -
Vimu8g02241 223 Pfam PPR repeat 15 36 IPR002885 -
Vimu8g02241 223 Pfam PPR repeat 52 74 IPR002885 -
Vimu8g02241 223 Coils Coil 192 212 - -
Vimu8g02241 223 Gene3D Tetratricopeptide repeat domain 1 184 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02241 - - gmx:100809627 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02241 8 29155523 29161376 Vimu8g02241 8 29155523 29161376 ECH