Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02234 ATGTTATTTGTATCTATCTTCTATCTTCTTCCTCATTGTCATGATGTTCTTACACAATACACTTGCTCCATTCACACAATGAAAGAATATCAGTTCCCATGTTGTGATCTTGACTTTTGGGGCTATTTTGTGGTATGTCTATTGTTGGTGTCTCTGGCAGGCATTGCATCTGGCCTTGCTCTAGGACTACTGTCCTTCAGCCTAGTTGATCTTGAGGTCCTCATTAAGGCAGGTCTTCCAAAAGACAGAAAGAATGCAGAAAGGATTAGACCTTTGGTAAAGAATGGACATTTTGTCCTGTGTACCCTTCTTCTAGGAAAATCACTGGCTATGGAGGCACTGCCAATTTTTATGGACGCAATCATCCCTTCTTGGTTTACTATTCTCGTGTCGGCACCCTTGGTGACTGTGTTTGCAGAGATTTTACCTCAAGCTATATGCTCTCGACATGGACTGACTTTAGGAGCAAAAATGGCTCCCATTGTTCAACTGCTTCTGCTGATCTTCTTCCCTATAACCTATCCTGCTAGTAAGGTGCTGGATTGGGGTCTAGGGAAAGAACATTCAGTTCTTCTCAGAAGATCAGAGTTGAAGACATTTGTGGACTTACATGCAGATGAGGCAGGGAAAGGGGGAGAATTGTCACATCATGAAACTTCTATAATCACAGGGGCTATAGATTTGACTCAGAAGACAGCTAAAGATGCAATGACACCCATATCTCAAACTTTTTCTCTTGATATAAATTCTAAACTTGACATGCATACAATGACACAAATAATGAACAAAGGTCACAGTCGAATACCAATCCATTCTGGACACGCAAGAAGTATCATTGGCCTCATATTGGTTAAAAACTTGATATTCTGCCGCCCTGAAGATGAGACACCTATAAAGAATTTGATTATCAGGAAAATTCCAAGAGTTTATGAAAGTTGGCCACTATATGAGATATTGAATCAATTCCAGAAGGGTCACAGTCACATGGCTATTGTCTTGAAATCCAACAAAGACACAGAGAGCACTACAACTCGTGCTGTGGGTGCACCCACCTATTTTAATATAATTACTCATAAAACATCAAATTCGGCTCATGCTGAAGTTGTTGCAGAATCTGATTCTTCCTTTGTCCTTGAAATGAGTCAGAGAAGTTCTGTACATGAATCCTGTTTAAACTCCAGTGATGCGGAATTTCATAGTCCAACGTTAAGAAATGTCACGGAACTAGACAGTGAAGCGAGTCAAGAAAATGAATATTTCTCACAGGAACAAATAGATTCTCTTCCTGATGTTATAGATGACGAGGTTATTGGCATCATCACAATGGAAGATGTCATGGAGGAATTGTTACAGGGAGACATATTGGATGAAACTGATGAATATGTTCACGTTCAAAAGAAGTGA 1404 0.3989 MLFVSIFYLLPHCHDVLTQYTCSIHTMKEYQFPCCDLDFWGYFVVCLLLVSLAGIASGLALGLLSFSLVDLEVLIKAGLPKDRKNAERIRPLVKNGHFVLCTLLLGKSLAMEALPIFMDAIIPSWFTILVSAPLVTVFAEILPQAICSRHGLTLGAKMAPIVQLLLLIFFPITYPASKVLDWGLGKEHSVLLRRSELKTFVDLHADEAGKGGELSHHETSIITGAIDLTQKTAKDAMTPISQTFSLDINSKLDMHTMTQIMNKGHSRIPIHSGHARSIIGLILVKNLIFCRPEDETPIKNLIIRKIPRVYESWPLYEILNQFQKGHSHMAIVLKSNKDTESTTTRAVGAPTYFNIITHKTSNSAHAEVVAESDSSFVLEMSQRSSVHESCLNSSDAEFHSPTLRNVTELDSEASQENEYFSQEQIDSLPDVIDDEVIGIITMEDVMEELLQGDILDETDEYVHVQKK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02234 467 Gene3D - 218 358 IPR046342 -
Vimu8g02234 467 CDD CBS_pair_CorC_HlyC_assoc 232 333 IPR044751 -
Vimu8g02234 467 ProSiteProfiles CNNM transmembrane domain profile. 35 218 IPR002550 -
Vimu8g02234 467 SUPERFAMILY CBS-domain pair 221 337 IPR046342 -
Vimu8g02234 467 PANTHER METAL TRANSPORTER CNNM 25 466 IPR045095 GO:0010960
Vimu8g02234 467 Pfam Cyclin M transmembrane N-terminal domain 45 215 IPR002550 -
Vimu8g02234 467 Gene3D - 400 457 IPR046342 -
Vimu8g02234 467 FunFam DUF21 domain-containing protein 216 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02234 Vimu-Chr8 29105379 29108843 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02234 K16302 - gmx:100791387 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02234 8 29105379 29108843 Vimu8g02234 8 29105379 29108843 ECH