Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02230 ATGAGGCAGGCTCTCTTTAAGTACTGTTTGATACTCAAAATTGAAAATCTTTCTGTTCTTTTTCCTTTAACTGTTGAATACATAACTAGTTTTGGAATCTTCATGCTTAGAACTGGGGTTGAGGCAGTGTCTGTGGACATGAAAGACCAGAAAATGACCGTAATTGGGAGTGTTGATTCTGTTAAAGTGGCGGTAAAGCTTAAAAAATTGTGTCATGCTGACATACTTTCAGTTGGACCTGCGAAGGAGGAGAAAAAGGAAGAACCGAAGAAAGAAGAGAAGAAACCAGAAGCAAAGAAAGATCCAAAGGAGGAATATGCTGAAGCTCTGAAGGTGTATGAAGCATATTTTAACCAAACCAGACAGCAACCATATCCATATTACTATTACAGAACAGTGGAAGAGAATCCAACTGGCTGTGTCATTTGCTAA 432 0.3866 MRQALFKYCLILKIENLSVLFPLTVEYITSFGIFMLRTGVEAVSVDMKDQKMTVIGSVDSVKVAVKLKKLCHADILSVGPAKEEKKEEPKKEEKKPEAKKDPKEEYAEALKVYEAYFNQTRQQPYPYYYYRTVEENPTGCVIC 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02230 143 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 25 137 - -
Vimu8g02230 143 Gene3D - 9 84 - -
Vimu8g02230 143 MobiDBLite consensus disorder prediction 80 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02230 Vimu-Chr8 29059983 29061187 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02230 - - gmx:100306444 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02230 8 29059983 29061187 Vimu8g02230 8 29059983 29061187 ECH
Vimu8g02230 8 29059983 29061187 Vimu3g02994 3 43964460 43965024 PCT