Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02182 ATGACGGATGTAGTACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAAACGAACAATACTATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGCATCTTCCACAGCGCCGTGCAGGTTTATGGAGAGGATGAATGGTCATTTGGATTCTGTGATCAAGGAACCGGAGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATTTCGTGAATCCATTGTTCTTGGGAAAACAAACTTTTCCATCTTCAAGGTGAATCAAATACTAAGAGAACTTAGTAGAGAGTGGCCAGGGAGTTCATATGATCTGCTGGCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGGCTTGATGTACCAAAACTTCCAGTTGAGCGATGGGATTTGGTTCTTGTGCTTTTTGTTAGTGCTGTGGAAGTGGACTTAGCTCTGTGGGTATTGCAGAAGGAACCACTGTTTGCGAATGCCGGTGATACTGCTATGGAAGTGGCTGGAAACACTGCATTACGGTTCCGGCAAGCTAAAACCGAGATTGTGTCAGCAAGCAAAGTAGCATACAGGTTCCTCTTAGGTGTTACGAATAATGTTACAAATAACGTTAAGAATGGTCCGGAGTCCCCTAACAACAACTCAAACAGAGGAGGGTCGCCTAGATTTCAAACTGCTTGGTTGAAAAATATGATCACTAATGGAGCAAAACCATCTACCAGTTCTGAAGCTGAGGATCAGAATGGAATTACGCCTCTACAGCCAAAGCGAGAAGATGAAAAAGCAATGCTACATAGTTCATCTTCACACGATAGTTGA 834 0.4269 MTDVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGEDEWSFGFCDQGTGVFSCPSGKNPMYTFRESIVLGKTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLDVPKLPVERWDLVLVLFVSAVEVDLALWVLQKEPLFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPESPNNNSNRGGSPRFQTAWLKNMITNGAKPSTSSEAEDQNGITPLQPKREDEKAMLHSSSSHDS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02182 277 Gene3D PPPDE domains 1 148 IPR042266 -
Vimu8g02182 277 MobiDBLite consensus disorder prediction 206 227 - -
Vimu8g02182 277 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Vimu8g02182 277 MobiDBLite consensus disorder prediction 239 277 - -
Vimu8g02182 277 SMART DUF862_2a 2 154 IPR008580 GO:0008233
Vimu8g02182 277 Pfam PPPDE putative peptidase domain 3 132 IPR008580 GO:0008233
Vimu8g02182 277 ProSiteProfiles PPPDE domain profile. 2 157 IPR008580 GO:0008233
Vimu8g02182 277 MobiDBLite consensus disorder prediction 239 254 - -
Vimu8g02182 277 MobiDBLite consensus disorder prediction 257 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02182 Vimu-Chr8 28298636 28301712 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02182 - - gmx:100814440 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02182 8 28298636 28301712 Vimu8g02182 8 28298636 28301712 ECH